RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 GPR150Q8NGU9 434 aa14.35□□□□□ -0.11
VPS16-205ENST00000453689 GABPB2Q8TAK5 448 aaPredicted RBP14.35□□□□□ -0.11
VPS16-205ENST00000453689 CALML6Q8TD86 181 aa14.35□□□□□ -0.11
VPS16-205ENST00000453689 LIN37Q96GY3 246 aaPredicted RBP14.35□□□□□ -0.11
VPS16-205ENST00000453689 CDC42EP4Q9H3Q1 356 aaKnown RBP14.35□□□□□ -0.11
VPS16-205ENST00000453689 SEMA6CQ9H3T2 930 aa14.35□□□□□ -0.11
VPS16-205ENST00000453689 LRRC4CQ9HCJ2 640 aa14.35□□□□□ -0.11
VPS16-205ENST00000453689 NINJ2Q9NZG7 142 aa14.35□□□□□ -0.11
VPS16-205ENST00000453689 IL1RAPL1Q9NZN1 696 aa14.35□□□□□ -0.11
VPS16-205ENST00000453689 MARCH4Q9P2E8 410 aaPredicted RBP14.35□□□□□ -0.11
VPS16-205ENST00000453689 FAM8A1Q9UBU6 413 aa14.35□□□□□ -0.11
VPS16-205ENST00000453689 PSMD13Q9UNM6 376 aa14.35□□□□□ -0.11
VPS16-205ENST00000453689 IGF2RP11717 2491 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 FREM2Q5SZK8 3169 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 PRAMEF33A0A0G2JMD5 474 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 PMS2P1A4D2B8 440 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 KLHL33A6NCF5 533 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 TMX2-CTNND1H3BSU7 103 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 PFDN6O15212 129 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 VIPP01282 170 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 FAM153BP0C7A2 387 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 HOXB3P14651 431 aaPredicted RBP14.34□□□□□ -0.11
VPS16-205ENST00000453689 SSTR1P30872 391 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 HALP42357 657 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 LSSP48449 732 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 TTPAP49638 278 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 GPX6P59796 221 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 MGAT5Q09328 741 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 SQSTM1Q13501 440 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 SEMA3AQ14563 771 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 CLPPQ16740 277 aaPredicted RBP14.34□□□□□ -0.11
VPS16-205ENST00000453689 TYSND1Q2T9J0 566 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 FAM153CQ494X1 144 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 HSP90AA5PQ58FG0 334 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 RNF187Q5TA31 235 aaPredicted RBP14.34□□□□□ -0.11
VPS16-205ENST00000453689 ZNF470Q6ECI4 717 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 ZNF449Q6P9G9 518 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 TRMT10BQ6PF06 316 aaKnown RBP14.34□□□□□ -0.11
VPS16-205ENST00000453689 PACS1Q6VY07 963 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 C3orf62Q6ZUJ4 267 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 SDCCAG8Q86SQ7 713 aaPredicted RBP14.34□□□□□ -0.11
VPS16-205ENST00000453689 UNC5BQ8IZJ1 945 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 LILRA3Q8N6C8 439 aaPredicted RBP14.34□□□□□ -0.11
VPS16-205ENST00000453689 OR10G6Q8NH81 332 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 HM13Q8TCT9 377 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 CXorf40BQ96DE9 158 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 PRR11Q96HE9 360 aaPredicted RBP14.34□□□□□ -0.11
VPS16-205ENST00000453689 AHCYL2Q96HN2 611 aaKnown RBP14.34□□□□□ -0.11
VPS16-205ENST00000453689 TCF12Q99081 682 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 TBC1D10AQ9BXI6 508 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 PARD6BQ9BYG5 372 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.34□□□□□ -0.11
VPS16-205ENST00000453689 WWP1Q9H0M0 922 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 UCK1Q9HA47 277 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 IARS2Q9NSE4 1012 aaKnown RBP14.34□□□□□ -0.11
VPS16-205ENST00000453689 POT1Q9NUX5 634 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 MOCS1Q9NZB8 636 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 RAB21Q9UL25 225 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 PRSS21Q9Y6M0 314 aa14.34□□□□□ -0.11
VPS16-205ENST00000453689 ACACAQ13085 2346 aa14.33□□□□□ -0.11
VPS16-205ENST00000453689 C17orf113A0A1B0GUU1 675 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 LILRA5A6NI73 299 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 DUX1O43812 170 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 DXOO77932 396 aaKnown RBP14.33□□□□□ -0.12
VPS16-205ENST00000453689 ERVK-10P10266 1014 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 STX2P32856 288 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 PHBP35232 272 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 NSG1P42857 185 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 PPM1FP49593 454 aaPredicted RBP14.33□□□□□ -0.12
VPS16-205ENST00000453689 LIMK2P53671 638 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 EPHA4P54764 986 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 NAA30Q147X3 362 aaPredicted RBP14.33□□□□□ -0.12
VPS16-205ENST00000453689 RPE65Q16518 533 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 KYNUQ16719 465 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 ZNF658BQ4V348 819 aaPredicted RBP14.33□□□□□ -0.12
VPS16-205ENST00000453689 PHF19Q5T6S3 580 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 TMEM26Q6ZUK4 368 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 CYS1Q717R9 158 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 LDB1Q86U70 411 aaPredicted RBP14.33□□□□□ -0.12
VPS16-205ENST00000453689 CILP2Q8IUL8 1156 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 CNTN4Q8IWV2 1026 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 CFAP206Q8IYR0 622 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 WDR36Q8NI36 951 aaKnown RBP14.33□□□□□ -0.12
VPS16-205ENST00000453689 CCM2Q9BSQ5 444 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 TXLNGYQ9BZA5 131 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 STRADBQ9C0K7 418 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 VPS37BQ9H9H4 285 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 SLC40A1Q9NP59 571 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 PPANQ9NQ55 473 aaKnown RBP14.33□□□□□ -0.12
VPS16-205ENST00000453689 TMEM9Q9P0T7 183 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 ACSL5Q9ULC5 683 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 PCDHGA8Q9Y5G5 932 aa14.33□□□□□ -0.12
VPS16-205ENST00000453689 SNRNP200O75643 2136 aaKnown RBP14.32□□□□□ -0.12
VPS16-205ENST00000453689 IGHV5-10-1A0A0J9YXX1 117 aa14.32□□□□□ -0.12
VPS16-205ENST00000453689 TCRBV9S1A1TA0A576 114 aa14.32□□□□□ -0.12
VPS16-205ENST00000453689 SRRM3A6NNA2 597 aaPredicted RBP14.32□□□□□ -0.12
VPS16-205ENST00000453689 TLX3O43711 291 aaPredicted RBP14.32□□□□□ -0.12
VPS16-205ENST00000453689 OR1I1O60431 355 aa14.32□□□□□ -0.12
VPS16-205ENST00000453689 NDUFS3O75489 264 aa14.32□□□□□ -0.12
VPS16-205ENST00000453689 AP2A2O94973 939 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms