RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 MCCC1Q96RQ3 725 aaPredicted RBP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 CINPQ9BW66 212 aaPredicted RBP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 ABCG8Q9H221 673 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 CARD9Q9H257 536 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 UPF2Q9HAU5 1272 aaKnown RBP7.64□□□□□ -1.19
LINC01961-201ENST00000449954 KLC4Q9NSK0 619 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 SIK3Q9Y2K2 1263 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 ZANQ9Y493 2812 aa7.64□□□□□ -1.19
LINC01961-201ENST00000449954 HRNRQ86YZ3 2850 aaPredicted RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 C17orf113A0A1B0GUU1 675 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 FAM237BA0A1B0GVD1 139 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 NPIPB15A6NHN6 443 aaPredicted RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 E7EQ34 232 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 LINC01387J3KSC0 135 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 P4HA2O15460 535 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 NUAK1O60285 661 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 PRAMEF11O60813 436 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 GADD45BO75293 160 aaPredicted RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 PALMO75781 387 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 ZNF202O95125 648 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 SIX3O95343 332 aaPredicted RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 MYBL2P10244 700 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 PYGMP11217 842 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 ZNF30P17039 623 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 MMP11P24347 488 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 NOS3P29474 1203 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 CACNG1Q06432 222 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 TFF3Q07654 80 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 INSCQ1MX18 579 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 FAM102AQ5T9C2 384 aaPredicted RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 AGAP9Q5VTM2 703 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 MLIPQ5VWP3 458 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 SHEQ5VZ18 495 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 FAM173BQ6P4H8 233 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 PAMR1Q6UXH9 720 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 WASH2PQ6VEQ5 465 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 LINC00696Q6ZRV3 163 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 PHLDB2Q86SQ0 1253 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 PASD1Q8IV76 773 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 RAVER1Q8IY67 606 aaKnown RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 CLYBLQ8N0X4 340 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 UMODL1-AS1Q8N2C9 162 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 Q8N3U1 123 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 TAB3Q8N5C8 712 aaPredicted RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 C3orf20Q8ND61 904 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 PROKR1Q8TCW9 393 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 ASB5Q8WWX0 329 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 SCAMP4Q969E2 229 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 SCRN2Q96FV2 425 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 DMRTA2Q96SC8 542 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 SECISBP2Q96T21 854 aaKnown RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 TLR10Q9BXR5 811 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 RASSF4Q9H2L5 321 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 CLEC4MQ9H2X3 399 aaPredicted RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 LIME1Q9H400 295 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 SEPT11Q9NVA2 429 aaKnown RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 IFT80Q9P2H3 777 aaPredicted RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 ARMCX3Q9UH62 379 aaPredicted RBP7.63□□□□□ -1.19
LINC01961-201ENST00000449954 CD84Q9UIB8 345 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 SERTAD3Q9UJW9 196 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 PPT2Q9UMR5 302 aa7.63□□□□□ -1.19
LINC01961-201ENST00000449954 HCFC1P51610 2035 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 OR5K3A6NET4 321 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 OR52A4PA6NMU1 304 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 TMEM150CB9EJG8 249 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 FAM72CH0Y354 149 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 SOCS6O14544 535 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 ALX3O95076 343 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 TSPAN12O95859 305 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 RAF1P04049 648 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 UMODP07911 640 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 H2AFB1P0C5Y9 115 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 H2AFB2P0C5Z0 115 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 TNFAIP3P21580 790 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 EPHB2P29323 1055 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 FLT3P36888 993 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 HALP42357 657 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 EIF1AXP47813 144 aaKnown RBP7.62□□□□□ -1.19
LINC01961-201ENST00000449954 SCNN1BP51168 640 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 RENBPP51606 427 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 CTSCP53634 463 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 RFTN1Q14699 578 aaPredicted RBP7.62□□□□□ -1.19
LINC01961-201ENST00000449954 SETDB1Q15047 1291 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 TUBB8Q3ZCM7 444 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 KRTCAP3Q53RY4 240 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 ZFYVE27Q5T4F4 411 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 FAM72AQ5TYM5 149 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 FAM72DQ6L9T8 149 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 NAPRTQ6XQN6 538 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 ARCQ7LC44 396 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 OOSP2Q86WS3 158 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 FAM72BQ86X60 149 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 ARHGEF19Q8IW93 802 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 TTC30BQ8N4P2 665 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 MYRIPQ8NFW9 859 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 OR1L3Q8NH93 324 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 GOT1L1Q8NHS2 421 aaPredicted RBP7.62□□□□□ -1.19
LINC01961-201ENST00000449954 LMO3Q8TAP4 145 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 SUN3Q8TAQ9 357 aa7.62□□□□□ -1.19
LINC01961-201ENST00000449954 AGAP11Q8TF27 550 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms