RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 LUZP1Q86V48 1076 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 CREBRFQ8IUR6 639 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 DNAAF3Q8N9W5 541 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 CCHCR1Q8TD31 782 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 MAGED4Q96JG8 741 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 SELENOOQ9BVL4 669 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 FANCLQ9NW38 375 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 PLA2G3Q9NZ20 509 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 DTLQ9NZJ0 730 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 LIMA1Q9UHB6 759 aaKnown RBP12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 CDC23Q9UJX2 597 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 CDYLQ9Y232 598 aa12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 NSD1Q96L73 2696 aaPredicted RBP12.18□□□□□ -0.46
AC004540.1-204ENST00000449537 C1orf232A0A0U1RR37 186 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 LRRC10BA6NIK2 292 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 CCP110O43303 1012 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 CBFA2T2O43439 604 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 KCNJ13O60928 360 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 PMPCBO75439 489 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 PEX11BO96011 259 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 POLR2CP19387 275 aaPredicted RBP12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 PRKAA1Q13131 559 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 ANKRD20A8PQ5CZ79 823 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 ZNF569Q5MCW4 686 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 ZFYVE27Q5T4F4 411 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 MRPL14Q6P1L8 145 aaKnown RBP12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 SARM1Q6SZW1 724 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 SPPL2CQ8IUH8 684 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 TMEM151BQ8IW70 566 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 NPWQ8N729 165 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 PROKR1Q8TCW9 393 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 NSMCE1Q8WV22 266 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 ZFPM2Q8WW38 1151 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 HAS2Q92819 552 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 SDCCAG3Q96C92 435 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 C18orf12Q96KH6 178 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 C11orf70Q9BRQ4 267 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 TUBGCP2Q9BSJ2 902 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 SIX2Q9NPC8 291 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 PSMD13Q9UNM6 376 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 CHKBQ9Y259 395 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 ZNF835Q9Y2P0 537 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 AP1M2Q9Y6Q5 423 aa12.17□□□□□ -0.46
AC004540.1-204ENST00000449537 INTS1Q8N201 2190 aaKnown RBP12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 LGALS16A8MUM7 142 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 PRAMEF2O60811 474 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 ZWINTO95229 277 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 IGFBP2P18065 325 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 UGT1A4P22310 534 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 MMP13P45452 471 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 ZNF143P52747 638 aaPredicted RBP12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 ITKQ08881 620 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 GALNT3Q14435 633 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 SLC9A5Q14940 896 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 KRT31Q15323 416 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 NKAIN1Q4KMZ8 207 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 FKBP15Q5T1M5 1219 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 MARC1Q5VT66 337 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 RHBDD2Q6NTF9 364 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 KIRREL2Q6UWL6 708 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 Q6ZPB1 254 aaPredicted RBP12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 RFX8Q6ZV50 586 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 NCCRP1Q6ZVX7 275 aaPredicted RBP12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 NOP9Q86U38 636 aaKnown RBP12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 SLC30A5Q8TAD4 765 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 N4BP2L2Q92802 583 aaPredicted RBP12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 GLYATL1Q969I3 302 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 IQCDQ96DY2 449 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 VPS50Q96JG6 964 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 HSD3B7Q9H2F3 369 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 DHX35Q9H5Z1 703 aaKnown RBP12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 SAMSN1Q9NSI8 373 aaKnown RBP12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 COQ3Q9NZJ6 369 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 KCNN3Q9UGI6 736 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 ST6GALNAC2Q9UJ37 374 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 EDARQ9UNE0 448 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 NUP210LQ5VU65 1888 aa12.16□□□□□ -0.46
AC004540.1-204ENST00000449537 C17orf113A0A1B0GUU1 675 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 EIF3CLB5ME19 914 aaKnown RBP12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 SOCS6O14544 535 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 MTX2O75431 263 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 WISP2O76076 250 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 SERPINC1P01008 464 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 INHBBP09529 407 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 MYBL2P10244 700 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 MTHFD1P11586 935 aaKnown RBP12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 UNGP13051 313 aaPredicted RBP12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 DNASE1P24855 282 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 LMAN1P49257 510 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 DMPKQ09013 629 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 XRCC4Q13426 336 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 TUBB8Q3ZCM7 444 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 VWA3BQ502W6 1294 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 PPP1R15BQ5SWA1 713 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 C11orf96Q7Z7L8 435 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 TRAPPC5Q8IUR0 188 aa12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 DMRTC2Q8IXT2 367 aaPredicted RBP12.15□□□□□ -0.46
AC004540.1-204ENST00000449537 LYSMD1Q96S90 227 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms