RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 FBXO22Q8NEZ5 403 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 KCNJ9Q92806 393 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 TMEM74Q96NL1 305 aa16.38■□□□□ 0.21
TCOF1-206ENST00000445265 TRMT13Q9NUP7 481 aaKnown RBP16.38■□□□□ 0.21
TCOF1-206ENST00000445265 MAGEB17A8MXT2 336 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 ADAMDEC1O15204 470 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 GRM6O15303 877 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 DIO3P55073 304 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 RPS7P62081 194 aaKnown RBP16.37■□□□□ 0.21
TCOF1-206ENST00000445265 LDLRAP1Q5SW96 308 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 ATXN7L2Q5T6C5 722 aaPredicted RBP16.37■□□□□ 0.21
TCOF1-206ENST00000445265 NPAS4Q8IUM7 802 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 ZNF420Q8TAQ5 688 aaPredicted RBP16.37■□□□□ 0.21
TCOF1-206ENST00000445265 C12orf43Q96C57 262 aaKnown RBP16.37■□□□□ 0.21
TCOF1-206ENST00000445265 OLFM1Q99784 485 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 ZNF99A8MXY4 864 aaPredicted RBP16.37■□□□□ 0.21
TCOF1-206ENST00000445265 PLK4O00444 970 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 SDE2Q6IQ49 451 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 AGMOQ6ZNB7 445 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 MTSS1LQ765P7 747 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 LUZP2Q86TE4 346 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 RAVER1Q8IY67 606 aaKnown RBP16.37■□□□□ 0.21
TCOF1-206ENST00000445265 ENKURQ8TC29 256 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 B3GALT6Q96L58 329 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 CORO1BQ9BR76 489 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 SPATA5L1Q9BVQ7 753 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 ENPP3O14638 875 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 XYLBO75191 536 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 ANXA4P09525 319 aaPredicted RBP16.37■□□□□ 0.21
TCOF1-206ENST00000445265 NR4A1P22736 598 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 ZBTB6Q15916 424 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 TMEM199Q8N511 208 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 PIK3C3Q8NEB9 887 aa16.37■□□□□ 0.21
TCOF1-206ENST00000445265 COL16A1Q07092 1604 aaPredicted RBP16.37■□□□□ 0.21
TCOF1-206ENST00000445265 COL6A1P12109 1028 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 NTSP30990 170 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 CTSKP43235 329 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 KCNQ1P51787 676 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 UGT2B15P54855 530 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 CCL23P55773 120 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 CYP4F2P78329 520 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 ECT2LQ008S8 904 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 HMGCS1Q01581 520 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 NAE1Q13564 534 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 DOK6Q6PKX4 331 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 AHSA2Q719I0 299 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 SLC15A3Q8IY34 581 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 ST13P5Q8NFI4 369 aaPredicted RBP16.36■□□□□ 0.21
TCOF1-206ENST00000445265 OR4F6Q8NGB9 312 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 TRNAU1APQ9NX07 287 aaKnown RBP16.36■□□□□ 0.21
TCOF1-206ENST00000445265 RUVBL1Q9Y265 456 aaKnown RBP16.36■□□□□ 0.21
TCOF1-206ENST00000445265 SAGE2PA6NJ88 616 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 H3BNH8 94 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 TNFRSF11BO00300 401 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 ZNF623O75123 536 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 PCDH8O95206 1070 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 MYLK3Q32MK0 819 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 TMC5Q6UXY8 1006 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 ANKFN1Q8N957 763 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 TEFMQ96QE5 360 aaKnown RBP16.36■□□□□ 0.21
TCOF1-206ENST00000445265 C20orf27Q9GZN8 174 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 COQ6Q9Y2Z9 468 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 PRR23AA6NEV1 266 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 PRKD3O94806 890 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 ELNP15502 786 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 GPR1P46091 355 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 YAP1P46937 504 aaKnown RBP16.36■□□□□ 0.21
TCOF1-206ENST00000445265 MED22Q15528 200 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 TGFBIQ15582 683 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 DGKKQ5KSL6 1271 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 C6orf136Q5SQH8 315 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 ZFP28Q8NHY6 868 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 PHF21AQ96BD5 680 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 PPP1R16AQ96I34 528 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 PAWRQ96IZ0 340 aaKnown RBP16.36■□□□□ 0.21
TCOF1-206ENST00000445265 ZNF382Q96SR6 550 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 FAM83DQ9H4H8 585 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 KAT8Q9H7Z6 458 aaKnown RBP16.36■□□□□ 0.21
TCOF1-206ENST00000445265 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.36■□□□□ 0.214e-6■□□□□ 11.1
TCOF1-206ENST00000445265 PSME2Q9UL46 239 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 RAB23Q9ULC3 237 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 ENTPD4Q9Y227 616 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 G6PDP11413 515 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 PAICSP22234 425 aaKnown RBP16.36■□□□□ 0.21
TCOF1-206ENST00000445265 PTPRCAPQ14761 206 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 TEAD4Q15561 434 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 COQ5Q5HYK3 327 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 OLIG1Q8TAK6 271 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 TMEM40Q8WWA1 233 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 ACDQ96AP0 544 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 SLC29A3Q9BZD2 475 aa16.36■□□□□ 0.21
TCOF1-206ENST00000445265 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.36■□□□□ 0.21
TCOF1-206ENST00000445265 ATG13O75143 517 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 NFKB2Q00653 900 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 MS4A2Q01362 244 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 SKIV2LQ15477 1246 aaKnown RBP16.35■□□□□ 0.21
TCOF1-206ENST00000445265 DENND5AQ6IQ26 1287 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 PTCHD4Q6ZW05 846 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 CDK20Q8IZL9 346 aa16.35■□□□□ 0.21
TCOF1-206ENST00000445265 FIBCD1Q8N539 461 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms