RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 FTSJ1Q9UET6 329 aa16.89■□□□□ 0.29
LIME1-202ENST00000444951 LRP4O75096 1905 aa16.89■□□□□ 0.29
LIME1-202ENST00000444951 TRABD2BA6NFA1 517 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 NUDT17P0C025 328 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 VCLP18206 1134 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 CCR7P32248 378 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 ACTR1BP42025 376 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 PREPP48147 710 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 SLC12A2P55011 1212 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 ACTR1AP61163 376 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 COL9A2Q14055 689 aaPredicted RBP16.88■□□□□ 0.29
LIME1-202ENST00000444951 USP10Q14694 798 aaKnown RBP16.88■□□□□ 0.29
LIME1-202ENST00000444951 TMED2Q15363 201 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 COL28A1Q2UY09 1125 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 FAM45BPQ6NSW5 357 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 FAM83HQ6ZRV2 1179 aaPredicted RBP16.88■□□□□ 0.29
LIME1-202ENST00000444951 TAOK1Q7L7X3 1001 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 OXR1Q8N573 874 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 ZNF548Q8NEK5 533 aaPredicted RBP16.88■□□□□ 0.29
LIME1-202ENST00000444951 FAM45AQ8TCE6 357 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 OLFM1Q99784 485 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 TIMM29Q9BSF4 260 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 MCMBPQ9BTE3 642 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 UCKL1Q9NWZ5 548 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 TRNAU1APQ9NX07 287 aaKnown RBP16.88■□□□□ 0.29
LIME1-202ENST00000444951 PSMC3IPQ9P2W1 217 aaPredicted RBP16.88■□□□□ 0.29
LIME1-202ENST00000444951 SPASTQ9UBP0 616 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 SLC24A2Q9UI40 661 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 TRMT6Q9UJA5 497 aaKnown RBP16.88■□□□□ 0.29
LIME1-202ENST00000444951 CORO1CQ9ULV4 474 aaPredicted RBP16.88■□□□□ 0.29
LIME1-202ENST00000444951 PSMD13Q9UNM6 376 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 DOLKQ9UPQ8 538 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 VWA7Q9Y334 891 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 ST14Q9Y5Y6 855 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 COMMD10Q9Y6G5 202 aa16.88■□□□□ 0.29
LIME1-202ENST00000444951 FASNP49327 2511 aaKnown RBP16.87■□□□□ 0.29
LIME1-202ENST00000444951 MGAT4DA6NG13 374 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 RASGRF2O14827 1237 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 FFAR2O15552 330 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 AQP9O43315 295 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 DFNA5O60443 496 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 PIAS2O75928 621 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 KRT38O76015 456 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 EPHA8P29322 1005 aaPredicted RBP16.87■□□□□ 0.29
LIME1-202ENST00000444951 SERPINB9P50453 376 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 CYP4F3Q08477 520 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 HSPA14Q0VDF9 509 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 PDAP1Q13442 181 aaKnown RBP16.87■□□□□ 0.29
LIME1-202ENST00000444951 ZNF460Q14592 562 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 CASP8Q14790 479 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 OTOAQ7RTW8 1153 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 KANSL1Q7Z3B3 1105 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 EID2Q8N6I1 236 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 OR2L2Q8NH16 312 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 CNDP2Q96KP4 475 aaKnown RBP16.87■□□□□ 0.29
LIME1-202ENST00000444951 ZIM3Q96PE6 472 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 GPR22Q99680 433 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 SLC30A3Q99726 388 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 DHRS4Q9BTZ2 278 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 GSDMCQ9BYG8 508 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 SPATS2LQ9NUQ6 558 aaKnown RBP16.87■□□□□ 0.29
LIME1-202ENST00000444951 TAS2R13Q9NYV9 303 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 MED16Q9Y2X0 877 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 DNMT3AQ9Y6K1 912 aaPredicted RBP16.87■□□□□ 0.29
LIME1-202ENST00000444951 IGSF10Q6WRI0 2623 aa16.87■□□□□ 0.29
LIME1-202ENST00000444951 TDRD6O60522 2096 aaKnown RBP16.86■□□□□ 0.29
LIME1-202ENST00000444951 PDZK1P1A8MUH7 402 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 TRIM49D1C9J1S8 452 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 PHGDHO43175 533 aaKnown RBP16.86■□□□□ 0.29
LIME1-202ENST00000444951 APOA4P06727 396 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 FDXRP22570 491 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 DGKAP23743 735 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 RPL10P27635 214 aaKnown RBP16.86■□□□□ 0.29
LIME1-202ENST00000444951 AOAHP28039 575 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 TAS2R39P59534 338 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 LRP8Q14114 963 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 ELOCQ15369 112 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 DEFB133Q30KQ1 61 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 INAVAQ3KP66 663 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 KRT71Q3SY84 523 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 ADGRD1Q6QNK2 874 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 RAPH1Q70E73 1250 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 CMC1Q7Z7K0 106 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 NRROSQ86YC3 692 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 CEP97Q8IW35 865 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 GALNT15Q8N3T1 639 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 ZBTB2Q8N680 514 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 GIMAP7Q8NHV1 300 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 HM13Q8TCT9 377 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 GPBAR1Q8TDU6 330 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 SKA2Q8WVK7 121 aaPredicted RBP16.86■□□□□ 0.29
LIME1-202ENST00000444951 KCNJ9Q92806 393 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 LINC00615Q96LM1 132 aaPredicted RBP16.86■□□□□ 0.29
LIME1-202ENST00000444951 COG4Q9H9E3 785 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 ZNF180Q9UJW8 692 aa16.86■□□□□ 0.29
LIME1-202ENST00000444951 TRBV23OR9-2A0A075B6M9 112 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 HMX2A2RU54 273 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 FOXO6A8MYZ6 492 aa16.85■□□□□ 0.29
LIME1-202ENST00000444951 LDOC1O95751 146 aaPredicted RBP16.85■□□□□ 0.29
LIME1-202ENST00000444951 ANXA6P08133 673 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms