RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SLC25A14O95258 325 aaPredicted RBP7.96□□□□□ -1.14
CCDC39-201ENST00000442201 TRIM16O95361 564 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 DNTTP04053 509 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 OR56A5P0C7T3 313 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 CD1DP15813 335 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 ATP5F1P24539 256 aaPredicted RBP7.96□□□□□ -1.14
CCDC39-201ENST00000442201 SERPINB3P29508 390 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 RPS14P62263 151 aaKnown RBP7.96□□□□□ -1.14
CCDC39-201ENST00000442201 CREB5Q02930 508 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 SF3A3Q12874 501 aaKnown RBP eCLIP7.96□□□□□ -1.14
CCDC39-201ENST00000442201 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.96□□□□□ -1.14
CCDC39-201ENST00000442201 ZNF765Q7L2R6 523 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 ISCA2Q86U28 154 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 TMPRSS6Q8IU80 811 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 GANCQ8TET4 914 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 BTN2A2Q8WVV5 523 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 NUS1Q96E22 293 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 CCDC126Q96EE4 140 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 C7orf26Q96N11 449 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 PANX3Q96QZ0 392 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 SLC30A3Q99726 388 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 MKRN2Q9H000 416 aaKnown RBP7.96□□□□□ -1.14
CCDC39-201ENST00000442201 TFB2MQ9H5Q4 396 aaKnown RBP7.96□□□□□ -1.14
CCDC39-201ENST00000442201 TMPRSS11EQ9UL52 423 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 STK38LQ9Y2H1 464 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 COQ6Q9Y2Z9 468 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 PRSS21Q9Y6M0 314 aa7.96□□□□□ -1.14
CCDC39-201ENST00000442201 SH3PXD2BA1X283 911 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 FADS2P1A8MWK0 482 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 F8W8V4 182 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 DLX3O60479 287 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 ATP5HO75947 161 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 CLCN7P51798 805 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 COPAP53621 1224 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 TBL3Q12788 808 aaKnown RBP7.95□□□□□ -1.14
CCDC39-201ENST00000442201 AGBL4Q5VU57 503 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 LIPMQ5VYY2 423 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 CPNE9Q8IYJ1 553 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 FAM13CQ8NE31 585 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 DDHD1Q8NEL9 900 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 GLYATL1Q969I3 302 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 VPS35Q96QK1 796 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 KCTD5Q9NXV2 234 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 UNC80Q8N2C7 3258 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 A0A1W2PP55 124 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 A0A1W2PQF6 199 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 SNNO75324 88 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-201ENST00000442201 PCDH8O95206 1070 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 ATP1B2P14415 290 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-201ENST00000442201 ETS2P15036 469 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 ITGB6P18564 788 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 MSH3P20585 1137 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 SLC1A6P48664 564 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 RGS4P49798 205 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 B4GALNT1Q00973 533 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 OVGP1Q12889 678 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 TTLL9Q3SXZ7 439 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 HSF5Q4G112 596 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-201ENST00000442201 EOGTQ5NDL2 527 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 LDLRAP1Q5SW96 308 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 CGB2Q6NT52 195 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 CRLF3Q8IUI8 442 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 RHEBL1Q8TAI7 183 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 STAG3L4Q8TBR4 150 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 NRG4Q8WWG1 115 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 KIAA1191Q96A73 305 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 PTERQ96BW5 349 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 EFHD2Q96C19 240 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-201ENST00000442201 LINGO1Q96FE5 620 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 GATA5Q9BWX5 397 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-201ENST00000442201 TRIM55Q9BYV6 548 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 FBXL12Q9NXK8 326 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 C6orf203Q9P0P8 240 aaPredicted RBP7.95□□□□□ -1.14
CCDC39-201ENST00000442201 TSC22D4Q9Y3Q8 395 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 TICRRQ7Z2Z1 1910 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 MAN2B1O00754 1011 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 MAGEC1O60732 1142 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 IL9P15248 144 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 FOSL1P15407 271 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 CD72P21854 359 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 NAGLUP54802 743 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 TAS2R38P59533 333 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 DPTQ07507 201 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 CES4AQ5XG92 561 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 B3GNT6Q6ZMB0 384 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 NLRP8Q86W28 1048 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 PHYKPLQ8IUZ5 450 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 ZBTB2Q8N680 514 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 OR6Y1Q8NGX8 325 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 RPLP0P6Q8NHW5 317 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 PPP4R1Q8TF05 950 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 EEF1AKMT1Q8WVE0 214 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 DGCR14Q96DF8 476 aaKnown RBP7.95□□□□□ -1.14
CCDC39-201ENST00000442201 PDLIM5Q96HC4 596 aaKnown RBP7.95□□□□□ -1.14
CCDC39-201ENST00000442201 KLHL42Q9P2K6 505 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 SERGEFQ9UGK8 458 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 SCML1Q9UN30 329 aa7.95□□□□□ -1.14
CCDC39-201ENST00000442201 TCF20Q9UGU0 1960 aaKnown RBP7.94□□□□□ -1.14
CCDC39-201ENST00000442201 QSOX1O00391 747 aa7.94□□□□□ -1.14
CCDC39-201ENST00000442201 BTN3A1O00481 513 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms