RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ATP6AP1LQ52LC2 224 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 EOGTQ5NDL2 527 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 CLEC6AQ6EIG7 209 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 KIAA1161Q6NSJ0 714 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 ADAMTSL4Q6UY14 1074 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 RFLNAQ6ZTI6 216 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 TSPEARQ8WU66 669 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 JADE3Q92613 823 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 FBXL8Q96CD0 374 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 HIC2Q96JB3 615 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 CCDC138Q96M89 665 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 CADM1Q9BY67 442 aaKnown RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 PLA2G2FQ9BZM2 168 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 SLC32A1Q9H598 525 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 NOL11Q9H8H0 719 aaKnown RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 IPPKQ9H8X2 491 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 ZBTB26Q9HCK0 441 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 ACSS2Q9NR19 701 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 GID8Q9NWU2 228 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 CLEC1BQ9P126 229 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 ANGPTL2Q9UKU9 493 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 SNX6Q9UNH7 406 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 EIF3LQ9Y262 564 aaKnown RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 NDUFAF1Q9Y375 327 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 DNMT3AQ9Y6K1 912 aaPredicted RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 NUMBLQ9Y6R0 609 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 MYO7AQ13402 2215 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 LOC100653049A0A140TA62 436 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 GPR89AB7ZAQ6 455 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 H3BM21 787 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 AIM2O14862 343 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 CLGNO14967 610 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 KRT34O76011 436 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 OR4F21O95013 312 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 GPR89BP0CG08 455 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 GLULP15104 373 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 NUDT2P50583 147 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 GALK1P51570 392 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 SH3BP2P78314 561 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 CREB5Q02930 508 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 ZNF33BQ06732 778 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 OGFOD2Q6N063 350 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 BNC2Q6ZN30 1099 aaPredicted RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 CHSY3Q70JA7 882 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 SYVN1Q86TM6 617 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 KBTBD6Q86V97 674 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 MYLK4Q86YV6 388 aaPredicted RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 GALNT13Q8IUC8 556 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 POU5F2Q8N7G0 328 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 CDYL2Q8N8U2 506 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 FAM13CQ8NE31 585 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 RHBDF1Q96CC6 855 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 PRR11Q96HE9 360 aaPredicted RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 LENG8Q96PV6 779 aaPredicted RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 TRPV5Q9NQA5 729 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 ITM2BQ9Y287 266 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 COPG1Q9Y678 874 aaKnown RBP5.91□□□□□ -1.46
VPS50-205ENST00000441602 GBF1Q92538 1859 aa5.91□□□□□ -1.46
VPS50-205ENST00000441602 C17orf113A0A1B0GUU1 675 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 OR2AG2A6NM03 316 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 IFRD1O00458 451 aaPredicted RBP5.9□□□□□ -1.46
VPS50-205ENST00000441602 ANGPT2O15123 496 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 KDM1AO60341 852 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 KCNJ13O60928 360 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 RNASEH2AO75792 299 aaKnown RBP5.9□□□□□ -1.46
VPS50-205ENST00000441602 ACADMP11310 421 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 PBLDP30039 288 aaPredicted RBP5.9□□□□□ -1.46
VPS50-205ENST00000441602 HNRNPH1P31943 449 aaKnown RBP5.9□□□□□ -1.46
VPS50-205ENST00000441602 TIE1P35590 1138 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 P2RY2P41231 377 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 WASP42768 502 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 HK3P52790 923 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 KCNK10P57789 538 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 RPA4Q13156 261 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 MAP7Q14244 749 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 GBX1Q14549 363 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 GRIN2CQ14957 1233 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 NR6A1Q15406 480 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 CACHD1Q5VU97 1274 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 C1orf146Q5VVC0 180 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.9□□□□□ -1.46
VPS50-205ENST00000441602 CYHR1Q6ZMK1 362 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 ASB11Q8WXH4 323 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 NSUN5Q96P11 429 aaKnown RBP5.9□□□□□ -1.46
VPS50-205ENST00000441602 ACOX2Q99424 681 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 IKZF3Q9UKT9 509 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 SARDHQ9UL12 918 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 GPR34Q9UPC5 381 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 DYRK1BQ9Y463 629 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 LRRC14BA6NHZ5 514 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 FADS2P1A8MWK0 482 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 ANHXE9PGG2 379 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 E2F3O00716 465 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 MRASO14807 208 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 MID1O15344 667 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 TBX10O75333 385 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 FKBP6O75344 327 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 SLCO2B1O94956 709 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 CLDN9O95484 217 aa5.9□□□□□ -1.46
VPS50-205ENST00000441602 HOXB2P14652 356 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms