RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 BCL7AQ4VC05 210 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 KHDC1Q4VXA5 237 aaKnown RBP12.92□□□□□ -0.34
CPSF4-206ENST00000441580 ATP6AP1LQ52LC2 224 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 PDCD4Q53EL6 469 aaKnown RBP12.92□□□□□ -0.34
CPSF4-206ENST00000441580 ATAT1Q5SQI0 421 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 WLSQ5T9L3 541 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 TANGO2Q6ICL3 276 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 LETMD1Q6P1Q0 360 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 SYCE2Q6PIF2 218 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 DET1Q7L5Y6 550 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 MYLK4Q86YV6 388 aaPredicted RBP12.92□□□□□ -0.34
CPSF4-206ENST00000441580 CDYL2Q8N8U2 506 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 OR52B6Q8NGF0 335 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 HMGCLL1Q8TB92 370 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 SCAMP4Q969E2 229 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 CCDC124Q96CT7 223 aaKnown RBP12.92□□□□□ -0.34
CPSF4-206ENST00000441580 RIPOR3Q96MK2 946 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 HDAC8Q9BY41 377 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 BRINP2Q9C0B6 783 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 IPPKQ9H8X2 491 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 PARVBQ9HBI1 364 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 ARL15Q9NXU5 204 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 CACNA2D2Q9NY47 1150 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 ZIM2Q9NZV7 527 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 SARDHQ9UL12 918 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 C15orf41Q9Y2V0 281 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 ASB1Q9Y576 335 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 ST14Q9Y5Y6 855 aa12.92□□□□□ -0.34
CPSF4-206ENST00000441580 DYTNA2CJ06 578 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 TBC1D3BA6NDS4 549 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 GRXCR2A6NFK2 248 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 OR7A17O14581 309 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 ANGPT2O15123 496 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 TAPBPO15533 448 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 NRP2O60462 931 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 STK16O75716 305 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 KAT7O95251 611 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 CAPN1P07384 714 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 LINC00032P0C843 101 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 EBLN1P0CF75 366 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 HLA-EP13747 358 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 GNAZP19086 355 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 GPX3P22352 226 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 PRDX3P30048 256 aaKnown RBP12.91□□□□□ -0.34
CPSF4-206ENST00000441580 GCKP35557 465 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 GGT5P36269 586 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 PSMD8P48556 350 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 ERVPABLB-1P60509 514 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 SLC34A1Q06495 639 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 DPTQ07507 201 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 FOXM1Q08050 763 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 HSPA14Q0VDF9 509 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 MAD2L1Q13257 205 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-206ENST00000441580 GTF2H3Q13889 308 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 GRIN2CQ14957 1233 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 RPS6KA2Q15349 733 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 ITPRIPL2Q3MIP1 535 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 POM121L1PQ3SYA9 428 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 FBXO48Q5FWF7 155 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 MTSS1LQ765P7 747 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 ERN2Q76MJ5 926 aaKnown RBP12.91□□□□□ -0.34
CPSF4-206ENST00000441580 MILR1Q7Z6M3 343 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 ADGRG6Q86SQ4 1221 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 NLRP8Q86W28 1048 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 GALNT13Q8IUC8 556 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 OR4F6Q8NGB9 312 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 CXorf40AQ8TE69 158 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 SKA2Q8WVK7 121 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-206ENST00000441580 ATL1Q8WXF7 558 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 DLG3Q92796 817 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 TMEM159Q96B96 161 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 PPP3R2Q96LZ3 170 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 NTMT1Q9BV86 223 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 SPAG4Q9NPE6 437 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 HEBP1Q9NRV9 189 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 CCDC167Q9P0B6 97 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 SUCOQ9UBS9 1254 aaKnown RBP12.91□□□□□ -0.34
CPSF4-206ENST00000441580 NKX1-2Q9UD57 310 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-206ENST00000441580 ZNF225Q9UK10 706 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 POMPQ9Y244 141 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 ITM2BQ9Y287 266 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 NDUFAF1Q9Y375 327 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 L3MBTL1Q9Y468 752 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 TIMM22Q9Y584 194 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 PTGDR2Q9Y5Y4 395 aa12.91□□□□□ -0.34
CPSF4-206ENST00000441580 MYO7AQ13402 2215 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 DOCK8Q8NF50 2099 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 A0A1B0GTL3 188 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 OTOL1A6NHN0 477 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-206ENST00000441580 SLC28A1O00337 649 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 NR5A2O00482 541 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 TRIM38O00635 465 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 SLCO2B1O94956 709 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 CATP04040 527 aaKnown RBP12.9□□□□□ -0.34
CPSF4-206ENST00000441580 C6P13671 934 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 PCSK2P16519 638 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 VHLP40337 213 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 IL12RB1P42701 662 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 MTHFRP42898 656 aa12.9□□□□□ -0.34
CPSF4-206ENST00000441580 RPIAP49247 311 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms