RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 LCN9Q8WX39 176 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 KLHL6Q8WZ60 621 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 MAP3K3Q99759 626 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 HELZ2Q9BYK8 2649 aaKnown RBP19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 IGLV3-16A0A075B6K0 115 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 IGHV5-51A0A0C4DH38 117 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 TRBV5-4A0A0C4DH59 114 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 LOC101059948A0A1B0GTJ6 334 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 MROH6A6NGR9 719 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 OR51F1A6NGY5 319 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 F8W8V4 182 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 QSOX1O00391 747 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 AP2A2O94973 939 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 DLGAP3O95886 979 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 FTH1P02794 183 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 GSTM1P09488 218 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 ETS1P14921 441 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 PREPP48147 710 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 PRAMEP78395 509 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 GSTM4Q03013 218 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 ACY1Q03154 408 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 MAP7Q14244 749 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 ITIH4Q14624 930 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 KCNAB1Q14722 419 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 TBR1Q16650 682 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 BORAQ6PGQ7 559 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 XKR5Q6UX68 686 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 MICALCLQ6ZW33 695 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 TIPARPQ7Z3E1 657 aaKnown RBP19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 PRUNE1Q86TP1 453 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 KMT5CQ86Y97 462 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 LRRC8AQ8IWT6 810 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 PIANPQ8IYJ0 282 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 GALNT6Q8NCL4 622 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 TRIM58Q8NG06 486 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 OR4E2Q8NGC2 313 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 OR6P1Q8NGX9 317 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 SLC12A9Q9BXP2 914 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 SRMSQ9H3Y6 488 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 HEMK1Q9Y5R4 338 aaPredicted RBP19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 RPS6KL1Q9Y6S9 549 aa19.35■□□□□ 0.69
SHROOM1-204ENST00000440118 CCDC162PA2VCL2 907 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 MATN2O00339 956 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 MAP3K7O43318 606 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 FGGP02679 453 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 CCNYL3P0C7X3 344 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 EBLN1P0CF75 366 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 SFTPCP11686 197 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 ZNF28P17035 718 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 POLR2CP19387 275 aaPredicted RBP19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 CDH3P22223 829 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 DLSTP36957 453 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 STAT5AP42229 794 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 HSD11B2P80365 405 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 BASP1P80723 227 aaKnown RBP19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 MC1RQ01726 317 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 NFATC3Q12968 1075 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 SEMA5AQ13591 1074 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 BOP1Q14137 746 aaKnown RBP19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 LINC00303Q3SY05 128 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 TMTC4Q5T4D3 741 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 CAPRIN2Q6IMN6 1127 aaKnown RBP19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 NLRP9Q7RTR0 991 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 STARD8Q92502 1023 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 ELMO1Q92556 727 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 SLC45A3Q96JT2 553 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 CATSPER2Q96P56 530 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 HGH1Q9BTY7 390 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 FAM117AQ9C073 453 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 FANCEQ9HB96 536 aa19.34■□□□□ 0.69
SHROOM1-204ENST00000440118 CEP104O60308 925 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 SUN1O94901 812 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 ZBTB11O95625 1053 aaPredicted RBP19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 MT-ND3P03897 115 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 FGF5P12034 268 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 ADRA1DP25100 572 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 RPA4Q13156 261 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 CCNG2Q16589 344 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 LYPLAL1Q5VWZ2 237 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 C16orf46Q6P387 395 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 HDAC10Q969S8 669 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 SLC41A2Q96JW4 573 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 MVB12BQ9H7P6 319 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 ANAPC5Q9UJX4 755 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 ZKSCAN5Q9Y2L8 839 aa19.33■□□□□ 0.68
SHROOM1-204ENST00000440118 TLN1Q9Y490 2541 aaKnown RBP19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 LIN7AO14910 233 aaPredicted RBP19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 SPAG6O75602 509 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 GOT2P00505 430 aaKnown RBP19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 OR56A5P0C7T3 313 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 ZSCAN5DPP0CG00 497 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 FOLR1P15328 257 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 TCN2P20062 427 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 FOXN2P32314 431 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 PPARGP37231 505 aaPredicted RBP19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 GRIA1P42261 906 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 CCR10P46092 362 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 CD151P48509 253 aa19.32■□□□□ 0.68
SHROOM1-204ENST00000440118 CDC20Q12834 499 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms