RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 S100A14Q9HCY8 104 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 PCDH12Q9NPG4 1184 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 LDLRP01130 860 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 FCGR1AP12314 374 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 HLA-EP13747 358 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 GDI1P31150 447 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 CPOXP36551 454 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 ARL4DP49703 201 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 MCCD1P59942 119 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 LRRC26Q2I0M4 334 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 OTUD1Q5VV17 481 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 PAOXQ6QHF9 649 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 GCNT7Q6ZNI0 430 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 SPATA19Q7Z5L4 167 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 GPR180Q86V85 440 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 SORCS1Q8WY21 1168 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 VPS33AQ96AX1 596 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 PYCR2Q96C36 320 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 CDK15Q96Q40 435 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 MGME1Q9BQP7 344 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 FAM192AQ9GZU8 254 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 MAGEE1Q9HCI5 957 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 PHPT1Q9NRX4 125 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 IL36AQ9UHA7 158 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 HMX2A2RU54 273 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 FAM149AA5PLN7 773 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 CLDN9O95484 217 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 DLGAP3O95886 979 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 C1QAP02745 245 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 DNAJB1P25685 340 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 CD70P32970 193 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 SEC13P55735 322 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 CNTN1Q12860 1018 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZNF789Q5FWF6 425 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 TCAIMQ8N3R3 496 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 PHTF2Q8N3S3 785 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 FAM81AQ8TBF8 368 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 KCNJ9Q92806 393 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 GLMNQ92990 594 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 KIAA1191Q96A73 305 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 OTUB2Q96DC9 234 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 PPM1MQ96MI6 270 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 RANBP9Q96S59 729 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 OLFM1Q99784 485 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 KLF16Q9BXK1 252 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 LRTM1Q9HBL6 345 aa11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 IMP3Q9NV31 184 aaKnown RBP11.39□□□□□ -0.59
TRAPPC9-202ENST00000438773 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 DEAF1O75398 565 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 HNF1BP35680 557 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 CCDC157Q569K6 752 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 PSAPL1Q6NUJ1 521 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 TMPRSS11BQ86T26 416 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 STK32CQ86UX6 486 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 KRT78Q8N1N4 520 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 CPSF7Q8N684 471 aaKnown RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 ITFG1Q8TB96 612 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 OTULINQ96BN8 352 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 OR52E6Q96RD3 313 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 CIB1Q99828 191 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 UPK3BL1B0FP48 263 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 UPK3BL2E5RIL1 263 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 MATN2O00339 956 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 TNFAIP8O95379 198 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 EPCAMP16422 314 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 ERVK-21P61565 698 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 CHIT1Q13231 466 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 CCNIQ14094 377 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 GPR107Q5VW38 600 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 NADSYN1Q6IA69 706 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 CAPN13Q6MZZ7 669 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 B3GNT6Q6ZMB0 384 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 PDSS2Q86YH6 399 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZNF513Q8N8E2 541 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 DRAXINQ8NBI3 349 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 MAGEE2Q8TD90 523 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 SCAMP4Q969E2 229 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 UBE2E3Q969T4 207 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 ZFYVE19Q96K21 471 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 SLC22A12Q96S37 553 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 YIPF2Q9BWQ6 316 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 TTLL2Q9BWV7 592 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 MRPS17Q9Y2R5 130 aaKnown RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 SPO11Q9Y5K1 396 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 TRIP12Q14669 1992 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 RGS5O15539 181 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 TRBC1P01850 177 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 PCCBP05166 539 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 CA3P07451 260 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 HNRNPA1P09651 372 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 PRSS56P0CW18 603 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 HOXC8P31273 242 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 CREB5Q02930 508 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 DCTN2Q13561 401 aaKnown RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 CCSAPQ6IQ19 270 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 ANKRD33Q7Z3H0 272 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 PGAM4Q8N0Y7 254 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 FLCNQ8NFG4 579 aa11.38□□□□□ -0.59
TRAPPC9-202ENST00000438773 KLK6Q92876 244 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms