RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ERFP50548 548 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 FLOT2Q14254 428 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 TECPR1Q7Z6L1 1165 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 MILR1Q7Z6M3 343 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 CDK15Q96Q40 435 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 TRPV4Q9HBA0 871 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 GDE1Q9NZC3 331 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 DEC1Q9P2X7 70 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 ANGPTL3Q9Y5C1 460 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 SZT2Q5T011 3432 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 SLC16A5O15375 505 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 RPSAP08865 295 aaKnown RBP25.21■■□□□ 1.63
CPNE1-216ENST00000437340 ATP6V1C1P21283 382 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 SP140Q13342 867 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 ZNF284Q2VY69 593 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 PDCD4Q53EL6 469 aaKnown RBP25.21■■□□□ 1.63
CPNE1-216ENST00000437340 TMEM184AQ6ZMB5 413 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 DHDDSQ86SQ9 333 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 NRSN1Q8IZ57 195 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 TCAIMQ8N3R3 496 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 OR2T11Q8NH01 316 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 FGF13Q92913 245 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 VPS35Q96QK1 796 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 FAM83CQ9BQN1 747 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 SLC12A9Q9BXP2 914 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 EBF3Q9H4W6 596 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 SUCOQ9UBS9 1254 aaKnown RBP25.21■■□□□ 1.63
CPNE1-216ENST00000437340 PACSIN3Q9UKS6 424 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 ANKRD12Q6UB98 2062 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 BCAS2O75934 225 aaPredicted RBP25.21■■□□□ 1.63
CPNE1-216ENST00000437340 RPIAP49247 311 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 GAB4Q2WGN9 574 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 C6orf136Q5SQH8 315 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 BLOC1S3Q6QNY0 202 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 NEK10Q6ZWH5 1172 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 SNX31Q8N9S9 440 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 NTMT1Q9BV86 223 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 TRIM54Q9BYV2 358 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 PARVBQ9HBI1 364 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 ADA2Q9NZK5 511 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 SUN2Q9UH99 717 aa25.21■■□□□ 1.63
CPNE1-216ENST00000437340 HEPACAM2A8MVW5 462 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 E7ENX8 843 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 NR5A2O00482 541 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 FTH1P02794 183 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 GGT5P36269 586 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 ARL1P40616 181 aaPredicted RBP25.2■■□□□ 1.62
CPNE1-216ENST00000437340 DIO3P55073 304 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 PDGFRLQ15198 375 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 ATP6AP1LQ52LC2 224 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 LDLRAP1Q5SW96 308 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 ZFP1Q6P2D0 407 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 LIPIQ6XZB0 460 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 Q6ZSR9 355 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 PARS2Q7L3T8 475 aaKnown RBP25.2■■□□□ 1.62
CPNE1-216ENST00000437340 HIPK4Q8NE63 616 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 TMIEQ8NEW7 156 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 ASB11Q8WXH4 323 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 NXPE3Q969Y0 559 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 ASB9Q96DX5 294 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 HOPXQ9BPY8 73 aaPredicted RBP25.2■■□□□ 1.62
CPNE1-216ENST00000437340 RIOK2Q9BVS4 552 aaKnown RBP25.2■■□□□ 1.62
CPNE1-216ENST00000437340 THG1LQ9NWX6 298 aaKnown RBP25.2■■□□□ 1.62
CPNE1-216ENST00000437340 ZIM2Q9NZV7 527 aa25.2■■□□□ 1.62
CPNE1-216ENST00000437340 PLXNA2O75051 1894 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 EDDM13A0A1B0GTR0 161 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 PRRT4C9JH25 899 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 H0Y858 1186 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 ANGPT2O15123 496 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 STK16O75716 305 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 ELFN1P0C7U0 828 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 EBLN1P0CF75 366 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 EPB42P16452 691 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 HMOX2P30519 316 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 HSPA14Q0VDF9 509 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 HNRNPA1L2Q32P51 320 aaKnown RBP25.19■■□□□ 1.62
CPNE1-216ENST00000437340 ANKRD54Q6NXT1 300 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 SYCE2Q6PIF2 218 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 IL27RAQ6UWB1 636 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 UBE2R2Q712K3 238 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-216ENST00000437340 DET1Q7L5Y6 550 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 DCBLD1Q8N8Z6 715 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 BTN2A2Q8WVV5 523 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 TMEM181Q9P2C4 612 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 TRPS1Q9UHF7 1281 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 PDE10AQ9Y233 779 aa25.19■■□□□ 1.62
CPNE1-216ENST00000437340 ACOT8O14734 319 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 KATNA1O75449 491 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 WDR47O94967 919 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 SLC6A11P48066 632 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 MS4A2Q01362 244 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 SAMD4BQ5PRF9 694 aaKnown RBP25.18■■□□□ 1.62
CPNE1-216ENST00000437340 PRMT9Q6P2P2 845 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 SCIMPQ6UWF3 145 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 GPR149Q86SP6 731 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 ZNF366Q8N895 744 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 OR8D1Q8WZ84 308 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 ZFYVE19Q96K21 471 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 SLC52A3Q9NQ40 469 aa25.18■■□□□ 1.62
CPNE1-216ENST00000437340 MBD1Q9UIS9 605 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms