RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 PCSK5Q92824 1860 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 GTPBP10A4D1E9 387 aaKnown RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 SMTNL1A8MU46 457 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 MID1O15344 667 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 CAMTA2O94983 1202 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 CELF2O95319 508 aaKnown RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 MOCS3O95396 460 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 TOMM40O96008 361 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 VIMP08670 466 aaKnown RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 DANCRP0C864 163 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 FCGR1AP12314 374 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 PDGFRAP16234 1089 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 CASTP20810 708 aaKnown RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 CDC25CP30307 473 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 CORO1AP31146 461 aaKnown RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 HOXC8P31273 242 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 SOAT1P35610 550 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 PSMC4P43686 418 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 POLGP54098 1239 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 TUBA1BP68363 451 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 EEF1A2Q05639 463 aaKnown RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 GTF2H2Q13888 395 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 CAVIN1Q6NZI2 390 aaKnown RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 GTF2H2CQ6P1K8 395 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 PACS1Q6VY07 963 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 CREB3L2Q70SY1 520 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 KMT5CQ86Y97 462 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 DCP1BQ8IZD4 617 aaKnown RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 RYBPQ8N488 228 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 GBGT1Q8N5D6 347 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 Q8NFD4 153 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 NTN5Q8WTR8 489 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 CCDC107Q8WV48 283 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 TMED6Q8WW62 240 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 SLC44A1Q8WWI5 657 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 ASB5Q8WWX0 329 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 EXT2Q93063 718 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 ABTB1Q969K4 478 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 MOB3AQ96BX8 217 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 RTP4Q96DX8 246 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 FAM84BQ96KN1 310 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 C1QTNF7Q9BXJ2 289 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 TM6SF1Q9BZW5 370 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 TBC1D7Q9P0N9 293 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 PADI3Q9ULW8 664 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 LIPGQ9Y5X9 500 aa4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZFP37Q9Y6Q3 630 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P45-201ENST00000435986 A0A087WV48 116 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 A0A0G2JPF8 293 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 HNRNPCL3B7ZW38 293 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 WDR1O75083 606 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 KDM4BO94953 1096 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 SLCO2B1O94956 709 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 LUC7L3O95232 432 aaKnown RBP4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 BAG2O95816 211 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 OR52Z1P0C646 297 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 HNRNPCL4P0DMR1 293 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 SAGP10523 405 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 CBLP22681 906 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 SLC6A6P31641 620 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 AHRP35869 848 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 TCF7P36402 384 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 ACSM1Q08AH1 577 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 PTK6Q13882 451 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 SLC39A14Q15043 492 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 C6orf136Q5SQH8 315 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZNF425Q6IV72 752 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZNF449Q6P9G9 518 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 RPAINQ86UA6 219 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 LCA5Q86VQ0 697 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 COMMD2Q86X83 199 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 UNC45BQ8IWX7 931 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 GPALPP1Q8IXQ4 340 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 KLHL7Q8IXQ5 586 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 CEP57L1Q8IYX8 460 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 SIX6OS1Q8N1H7 587 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 MUC20Q8N307 709 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 OR2AJ1Q8NGZ0 328 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 OR52I2Q8NH67 350 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 C9orf43Q8TAL5 461 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 FIG4Q92562 907 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 SEMA4DQ92854 862 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 SPSB1Q96BD6 273 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 SCMH1Q96GD3 660 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 LINC00615Q96LM1 132 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 CAMK1GQ96NX5 476 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 ABHD6Q9BV23 337 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 DPAGT1Q9H3H5 408 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 TMEM30AQ9NV96 361 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 PRMT7Q9NVM4 692 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 ZNF112Q9UJU3 913 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 TMCC3Q9ULS5 477 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 PADI2Q9Y2J8 665 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 SNX5Q9Y5X3 404 aa4.36□□□□□ -1.71
HMGB1P45-201ENST00000435986 PRSS51A0A1B0GVH4 220 aa4.35□□□□□ -1.71
HMGB1P45-201ENST00000435986 A0A1W2PP11 408 aa4.35□□□□□ -1.71
HMGB1P45-201ENST00000435986 PRR32B1ATL7 298 aa4.35□□□□□ -1.71
HMGB1P45-201ENST00000435986 TMEM178BH3BS89 294 aa4.35□□□□□ -1.71
HMGB1P45-201ENST00000435986 PSMD14O00487 310 aa4.35□□□□□ -1.71
HMGB1P45-201ENST00000435986 IFIT3O14879 490 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms