RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SKA2Q8WVK7 121 aaPredicted RBP10.78□□□□□ -0.68
CHD4-202ENST00000430771 PKNOX2Q96KN3 472 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 RMDN2Q96LZ7 410 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 TSNARE1Q96NA8 513 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 ZIM3Q96PE6 472 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 ACBD3Q9H3P7 528 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 SNX15Q9NRS6 342 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 GULP1Q9UBP9 304 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 CTNNAL1Q9UBT7 734 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 TBK1Q9UHD2 729 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 PCOLCE2Q9UKZ9 415 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 PLEKHM1Q9Y4G2 1056 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 HEBP2Q9Y5Z4 205 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 OTOGLQ3ZCN5 2332 aa10.78□□□□□ -0.68
CHD4-202ENST00000430771 COL5A1P20908 1838 aaPredicted RBP10.77□□□□□ -0.68
CHD4-202ENST00000430771 TLDC2A0PJX2 215 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 PABPN1LA6NDY0 278 aaKnown RBP10.77□□□□□ -0.69
CHD4-202ENST00000430771 YY2O15391 372 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 PHGDHO43175 533 aaKnown RBP10.77□□□□□ -0.69
CHD4-202ENST00000430771 SLCO2B1O94956 709 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 MPOP05164 745 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 MYZAPP0CAP1 466 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 MPC1LP0DKB6 136 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 KRT15P19012 456 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 TYK2P29597 1187 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 GRK6P43250 576 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 MAGEA12P43365 314 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 KPNA2P52292 529 aaKnown RBP10.77□□□□□ -0.69
CHD4-202ENST00000430771 IL2P60568 153 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 ZNF844Q08AG5 666 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 BNIP3Q12983 259 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 SP140Q13342 867 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 BIRC2Q13490 618 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 ZNF460Q14592 562 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 DEFB133Q30KQ1 61 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 CEP85LQ5SZL2 805 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 ABRAXAS1Q6UWZ7 409 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 ASCL5Q7RTU5 278 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 KANSL1Q7Z3B3 1105 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 CMC1Q7Z7K0 106 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 TBC1D1Q86TI0 1168 aaPredicted RBP10.77□□□□□ -0.69
CHD4-202ENST00000430771 GATAD2AQ86YP4 633 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 TRIM48Q8IWZ4 208 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 ARL10Q8N8L6 244 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 OR4C6Q8NH72 309 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 MAPK15Q8TD08 544 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 LINGO1Q96FE5 620 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 C12orf66Q96MD2 445 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 WWP1Q9H0M0 922 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 STMN4Q9H169 189 aaPredicted RBP10.77□□□□□ -0.69
CHD4-202ENST00000430771 OR52A5Q9H2C5 316 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 VIPAS39Q9H9C1 493 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 CAB39LQ9H9S4 337 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 PRDM8Q9NQV8 689 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 POT1Q9NUX5 634 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 UCKL1Q9NWZ5 548 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 EURLQ9NYK6 297 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 NCKIPSDQ9NZQ3 722 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.77□□□□□ -0.69
CHD4-202ENST00000430771 TBC1D29Q9UFV1 150 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 LGALS13Q9UHV8 139 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 TLK1Q9UKI8 766 aa10.77□□□□□ -0.69
CHD4-202ENST00000430771 A0A096LPK6 155 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 A6NCN8 305 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 RGS16O15492 202 aaPredicted RBP10.76□□□□□ -0.69
CHD4-202ENST00000430771 KDM1AO60341 852 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 GFRA3O60609 400 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 ALDOAP04075 364 aaKnown RBP10.76□□□□□ -0.69
CHD4-202ENST00000430771 MTHFD1P11586 935 aaKnown RBP10.76□□□□□ -0.69
CHD4-202ENST00000430771 RPL10P27635 214 aaKnown RBP10.76□□□□□ -0.69
CHD4-202ENST00000430771 NDUFS1P28331 727 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 SLC26A3P40879 764 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 RPIAP49247 311 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 ACSBG2Q5FVE4 666 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 PAQR3Q6TCH7 311 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 UNC5DQ6UXZ4 953 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 NAPRTQ6XQN6 538 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 TIFABQ6ZNK6 161 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 SLC9B2Q86UD5 537 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 CEP97Q8IW35 865 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 RBM12BQ8IXT5 1001 aaKnown RBP10.76□□□□□ -0.69
CHD4-202ENST00000430771 IQCKQ8N0W5 287 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 SLC25A45Q8N413 288 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 LILRA3Q8N6C8 439 aaPredicted RBP10.76□□□□□ -0.69
CHD4-202ENST00000430771 ACVR1CQ8NER5 493 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 MAGEC3Q8TD91 643 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 ACMSDQ8TDX5 336 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 CXorf40BQ96DE9 158 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 PHOX2BQ99453 314 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 SLC30A3Q99726 388 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 IMP3Q9NV31 184 aaKnown RBP10.76□□□□□ -0.69
CHD4-202ENST00000430771 PCMTD2Q9NV79 361 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 SENP1Q9P0U3 644 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 SIRPGQ9P1W8 387 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 PSMD13Q9UNM6 376 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 CDYLQ9Y232 598 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 ACOT9Q9Y305 439 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 ST14Q9Y5Y6 855 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 NFS1Q9Y697 457 aa10.76□□□□□ -0.69
CHD4-202ENST00000430771 HMX2A2RU54 273 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms