RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 GAPDHSO14556 408 aaPredicted RBP17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 CAPN1P07384 714 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 NFKB1P19838 968 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 OTX2P32243 289 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 NCF4Q15080 339 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 PLEKHN1Q494U1 663 aaPredicted RBP17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 ODF2Q5BJF6 829 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 VWA5B1Q5TIE3 1220 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 VSIG1Q86XK7 387 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 CISD2Q8N5K1 135 aaKnown RBP17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 RMDN2Q96LZ7 410 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 C5orf34Q96MH7 638 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 C1GALT1Q9NS00 363 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 ASF1BQ9NVP2 202 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 TMEM63CQ9P1W3 806 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 SLC5A6Q9Y289 635 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 COLEC10Q9Y6Z7 277 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 CNTRLQ7Z7A1 2325 aa17.8■□□□□ 0.44
UPK3BP1-201ENST00000428678 WIPF3A6NGB9 483 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 MAP3K7O43318 606 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 CBX6O95503 412 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 POLBP06746 335 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 NDUFS1P28331 727 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 CD68P34810 354 aaPredicted RBP17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 PBX1P40424 430 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 ADCY2Q08462 1091 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 PRKD1Q15139 912 aaPredicted RBP17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 ZNF789Q5FWF6 425 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 OR2L2Q8NH16 312 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 LCN9Q8WX39 176 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 RNF25Q96BH1 459 aaPredicted RBP17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 SYTL2Q9HCH5 934 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 SMOXQ9NWM0 555 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 C5AR2Q9P296 337 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 SERTAD3Q9UJW9 196 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 B3GNT3Q9Y2A9 372 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 PADI2Q9Y2J8 665 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 PCSK5Q92824 1860 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 ANKRD17O75179 2603 aaKnown RBP17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 CSMD1Q96PZ7 3565 aa17.79■□□□□ 0.44
UPK3BP1-201ENST00000428678 CCDC88CQ9P219 2028 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 KLHL33A6NCF5 533 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 MATN2O00339 956 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 PRAMEF1O95521 474 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 EPOP01588 193 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 ST6GAL1P15907 406 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 LMAN1P49257 510 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 FANCCQ00597 558 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 ELOAQ14241 798 aaKnown RBP17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 PTPRCAPQ14761 206 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 IQCB1Q15051 598 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 SLC1A5Q15758 541 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 ZRANB3Q5FWF4 1079 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 MRGPREQ86SM8 312 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 DAAM2Q86T65 1068 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 LILRA3Q8N6C8 439 aaPredicted RBP17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 IPMKQ8NFU5 416 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 ZNF398Q8TD17 642 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 TFB1MQ8WVM0 346 aaKnown RBP17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 IQCDQ96DY2 449 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 MRGPRX2Q96LB1 330 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 ILKAPQ9H0C8 392 aaPredicted RBP17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 KLHL25Q9H0H3 589 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 SRMSQ9H3Y6 488 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 KLHL8Q9P2G9 620 aaPredicted RBP17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 SAE1Q9UBE0 346 aaPredicted RBP17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 HEBP2Q9Y5Z4 205 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 FER1L5A0AVI2 2057 aa17.78■□□□□ 0.44
UPK3BP1-201ENST00000428678 ANKUB1A6NFN9 424 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 E7EQ34 232 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 STX7O15400 261 aaKnown RBP17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 GYPCP04921 128 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 ALPPP05187 535 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 ATXN8OSP0DMR3 200 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 PYGMP11217 842 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 TNNT1P13805 278 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 AGXTP21549 392 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 UBASH3AP57075 661 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 WASHC5Q12768 1159 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 LYPLAL1Q5VWZ2 237 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 BZW1Q7L1Q6 419 aaKnown RBP17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 CFAP206Q8IYR0 622 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 ACVR1CQ8NER5 493 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 OXNAD1Q96HP4 312 aaPredicted RBP17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 DPH2Q9BQC3 489 aaPredicted RBP17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 SVILO95425 2214 aa17.77■□□□□ 0.44
UPK3BP1-201ENST00000428678 ZNF749O43361 778 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 LDB2O43679 373 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 TMEM253P0C7T8 217 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 MSL3P1P0C860 447 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 PRDX3P30048 256 aaKnown RBP17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 NR2C2P49116 596 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 TPM4P67936 248 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 SLC18A3Q16572 532 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 BCL7AQ4VC05 210 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 CLEC1AQ8NC01 280 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 SLC35G2Q8TBE7 412 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 DCUN1D1Q96GG9 259 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 FER1L6-AS2Q96M78 137 aa17.76■□□□□ 0.43
UPK3BP1-201ENST00000428678 IP6K3Q96PC2 410 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms