RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 TMEM184BQ9Y519 407 aaPredicted RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 KCTD3Q9Y597 815 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SAR1BQ9Y6B6 198 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 COMMD10Q9Y6G5 202 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SEC16AO15027 2179 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 CCDC162PA2VCL2 907 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 CTAGE9A4FU28 777 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 TLCD2A6NGC4 264 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 SDR42E2A6NKP2 422 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 STMND1H3BQB6 276 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 BUD23O43709 281 aaKnown RBP8.92□□□□□ -0.98
SMC1A-203ENST00000428014 GPC4O75487 556 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 USP1O94782 785 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 SLCO2B1O94956 709 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 KRT14P02533 472 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 ESR1P03372 595 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 RPN2P04844 631 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 ACADLP28330 430 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 ARSDP51689 593 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 TMPRSS3P57727 454 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 SNX1Q13596 522 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 PTK6Q13882 451 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 BOP1Q14137 746 aaKnown RBP8.92□□□□□ -0.98
SMC1A-203ENST00000428014 DHX34Q14147 1143 aaKnown RBP8.92□□□□□ -0.98
SMC1A-203ENST00000428014 GPR18Q14330 331 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 NFE2L1Q14494 772 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 C16orf72Q14CZ0 275 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMC1A-203ENST00000428014 ZRANB3Q5FWF4 1079 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 DCAF12Q5T6F0 453 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 TTC27Q6P3X3 843 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 UNC5DQ6UXZ4 953 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 TMPRSS9Q7Z410 1059 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 SDCCAG8Q86SQ7 713 aaPredicted RBP8.92□□□□□ -0.98
SMC1A-203ENST00000428014 OOSP2Q86WS3 158 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 CREG2Q8IUH2 290 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 SFTPA2Q8IWL1 248 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 SPACA3Q8IXA5 215 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 PPIL6Q8IXY8 311 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 NAT8LQ8N9F0 302 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 Q8N9G6 341 aaPredicted RBP8.92□□□□□ -0.98
SMC1A-203ENST00000428014 COG1Q8WTW3 980 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 CPT1BQ92523 772 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 HDAC10Q969S8 669 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 CCDC74BQ96LY2 380 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 NAPGQ99747 312 aaPredicted RBP8.92□□□□□ -0.98
SMC1A-203ENST00000428014 P2RY12Q9H244 342 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 SEMA6CQ9H3T2 930 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 PRORYQ9H606 182 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 CATSPERZQ9NTU4 200 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 INTS10Q9NVR2 710 aaKnown RBP8.92□□□□□ -0.98
SMC1A-203ENST00000428014 OR6C2Q9NZP2 312 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 OGFRQ9NZT2 677 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 SLC24A2Q9UI40 661 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 BTRCQ9Y297 605 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 WDR37Q9Y2I8 494 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 PRKAB1Q9Y478 270 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 ADAMTS20P59510 1910 aa8.92□□□□□ -0.98
SMC1A-203ENST00000428014 LAMA5O15230 3695 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 CFAP47Q6ZTR5 3102 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 OR5K3A6NET4 321 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 F5H423 210 aaPredicted RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 K7ENP7 123 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 CD3EAPO15446 510 aaKnown RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 SNX2O60749 519 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 GOT2P00505 430 aaKnown RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 MT-ND3P03897 115 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 FGF3P11487 239 aaPredicted RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 FGF5P12034 268 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 AMD1P17707 334 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 TPH1P17752 444 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 NELFEP18615 380 aaKnown RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 ARNTP27540 789 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 RPL10P27635 214 aaKnown RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 SLC5A2P31639 672 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 CA5AP35218 305 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 GRIA1P42261 906 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 PAFAH1B1P43034 410 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 KCNJ1P48048 391 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 ARCN1P48444 511 aaKnown RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 RHDQ02161 417 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 ACY1Q03154 408 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 GPS1Q13098 491 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 SEPT6Q14141 434 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 GBX1Q14549 363 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 PTPRCAPQ14761 206 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 NAA25Q14CX7 972 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 MORF4L2Q15014 288 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 AMZ1Q400G9 498 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 PLEKHS1Q5SXH7 462 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 ZNF648Q5T619 568 aaPredicted RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 PHF19Q5T6S3 580 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 LRRC8EQ6NSJ5 796 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 INO80CQ6PI98 192 aaPredicted RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 BLOC1S3Q6QNY0 202 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 FAM83HQ6ZRV2 1179 aaPredicted RBP8.91□□□□□ -0.98
SMC1A-203ENST00000428014 KIAA0408Q6ZU52 694 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 NEK10Q6ZWH5 1172 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 TAS2R42Q7RTR8 314 aa8.91□□□□□ -0.98
SMC1A-203ENST00000428014 ZNF572Q7Z3I7 529 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms