RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CSTF1Q05048 431 aaKnown RBP14.25□□□□□ -0.13
PTPN13-203ENST00000427191 CELF3Q5SZQ8 465 aaKnown RBP14.25□□□□□ -0.13
PTPN13-203ENST00000427191 ATP6AP2A0A1C7CYW4 349 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 LGALS2P05162 132 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 MPP1Q00013 466 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 LDLRAP1Q5SW96 308 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ADGRD1Q6QNK2 874 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 NCSTNQ92542 709 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ZNF514Q96K75 400 aaPredicted RBP14.24□□□□□ -0.13
PTPN13-203ENST00000427191 PLEKHA6Q9Y2H5 1048 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 DAPL1A0PJW8 107 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ANXA3P12429 323 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 CRISP3P54108 245 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 PHC1P78364 1004 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 VLDLRP98155 873 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 NOMO2Q5JPE7 1267 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ZNF782Q6ZMW2 699 aaPredicted RBP14.24□□□□□ -0.13
PTPN13-203ENST00000427191 B3GAT2Q9NPZ5 323 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ZNF358Q9NW07 568 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 PCDHB9Q9Y5E1 797 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 H3BUI4 141 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 NUMBP49757 651 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 TIGD6Q17RP2 521 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 IDNKQ5T6J7 187 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 GALNT15Q8N3T1 639 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ATAD1Q8NBU5 361 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 RBM15BQ8NDT2 890 aaKnown RBP14.24□□□□□ -0.13
PTPN13-203ENST00000427191 TMPRSS4Q9NRS4 437 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ELOVL2Q9NXB9 296 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 SH3D21A4FU49 640 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ADGRE1Q14246 886 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 GALNT13Q8IUC8 556 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 OR4C15Q8NGM1 316 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 XAGE5Q8WWM1 108 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 OTUB2Q96DC9 234 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 SIPA1Q96FS4 1042 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ACO2Q99798 780 aaKnown RBP14.24□□□□□ -0.13
PTPN13-203ENST00000427191 EQTNQ9NQ60 294 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 U3KQV3 271 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 H7C2Y5 167 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ARL6IP5O75915 188 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 PDYNP01213 254 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 C2orf80Q0P641 193 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 CTBP1Q13363 440 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 VWA5B1Q5TIE3 1220 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 MAFIPQ8WZ33 124 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ADAM2Q99965 735 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 LRRC3Q9BY71 257 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 MKKSQ9NPJ1 570 aaPredicted RBP14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ARHGEF4Q9NR80 690 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ARHGAP23Q9P227 1491 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 MOXD2PA6NHM9 499 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 GNA12Q03113 381 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.24□□□□□ -0.13
PTPN13-203ENST00000427191 NPNTQ6UXI9 565 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.24□□□□□ -0.13
PTPN13-203ENST00000427191 POFUT2Q9Y2G5 429 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 NUMA1Q14980 2115 aa14.24□□□□□ -0.13
PTPN13-203ENST00000427191 B3GALT2O43825 422 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 BPNT1O95861 308 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 BAIAP2L2Q6UXY1 529 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 GK5Q6ZS86 529 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 PCDH19Q8TAB3 1148 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 SETD6Q8TBK2 473 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 MICAL3Q7RTP6 2002 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 ADAMTS3O15072 1205 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 KDM4BO94953 1096 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 SLC1A5Q15758 541 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 ECHDC2Q86YB7 292 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 COX18Q8N8Q8 333 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 DENND1AQ8TEH3 1009 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 GAD1Q99259 594 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 ABCG4Q9H172 646 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 ERVK-5Q9HDB9 667 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 HMX1Q9NP08 348 aaPredicted RBP14.23□□□□□ -0.13
PTPN13-203ENST00000427191 KCNMB3Q9NPA1 279 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 MAP4K5Q9Y4K4 846 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 MYO5BQ9ULV0 1848 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 TTLL8A6PVC2 850 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 CCNCP24863 283 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 PIGZQ86VD9 579 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 TOMM5Q8N4H5 51 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 OR2L2Q8NH16 312 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 OR10G6Q8NH81 332 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 APOLD1Q96LR9 279 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 AQP12BA6NM10 295 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 TTC34A8MYJ7 566 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 PDHXO00330 501 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 F8A1P23610 371 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 S100PP25815 95 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 CCKBRP32239 447 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 CLCN4P51793 760 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 FOXM1Q08050 763 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 TLR1Q15399 786 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 GPR158Q5T848 1215 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 MSANTD2Q6P1R3 559 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 AQP12AQ8IXF9 295 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 ZNF709Q8N972 641 aa14.23□□□□□ -0.13
PTPN13-203ENST00000427191 VANGL1Q8TAA9 524 aaPredicted RBP14.23□□□□□ -0.13
PTPN13-203ENST00000427191 COQ8BQ96D53 544 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms