RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 HTR6P50406 440 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 RCAN2Q14206 197 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 TGFBIQ15582 683 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 PPP4R4Q6NUP7 873 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 SLC2A7Q6PXP3 512 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 IL27RAQ6UWB1 636 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 EFL1Q7Z2Z2 1120 aaKnown RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 ZNF786Q8N393 782 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 METTL6Q8TCB7 284 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 CYGBQ8WWM9 190 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 SMG7Q92540 1137 aaKnown RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 TMIGD2Q96BF3 282 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 HIC2Q96JB3 615 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 NUSAP1Q9BXS6 441 aaKnown RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 PNPLA3Q9NST1 481 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 RIC8BQ9NVN3 520 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 DUS2Q9NX74 493 aaKnown RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 PTTG2Q9NZH5 202 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 ZMYM5Q9UJ78 669 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 LSM7Q9UK45 103 aaKnown RBP10.51□□□□□ -0.73
CUX1-205ENST00000425244 OAZ3Q9UMX2 235 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 DMTF1Q9Y222 760 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 PKP3Q9Y446 797 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 PCDHA9Q9Y5H5 950 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 SLC30A1Q9Y6M5 507 aa10.51□□□□□ -0.73
CUX1-205ENST00000425244 H0YJX3 145 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 LEFTY2O00292 366 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 E2F3O00716 465 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 CLIC3O95833 236 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 CAPN1P07384 714 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 ERVPABLB-1P60509 514 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 XKR7Q5GH72 579 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 NHSL2Q5HYW2 709 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 AARS2Q5JTZ9 985 aaKnown RBP10.5□□□□□ -0.73
CUX1-205ENST00000425244 C6orf136Q5SQH8 315 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 PTRHD1Q6GMV3 140 aaKnown RBP10.5□□□□□ -0.73
CUX1-205ENST00000425244 LCN8Q6JVE9 175 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 OGFOD2Q6N063 350 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 CXorf57Q6NSI4 855 aaKnown RBP10.5□□□□□ -0.73
CUX1-205ENST00000425244 LETMD1Q6P1Q0 360 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 LYSMD3Q7Z3D4 306 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 RALGPS2Q86X27 583 aaPredicted RBP10.5□□□□□ -0.73
CUX1-205ENST00000425244 CAMK1DQ8IU85 385 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 EPHX4Q8IUS5 362 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 KIAA2013Q8IYS2 634 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 ADGRG5Q8IZF4 528 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 ARL10Q8N8L6 244 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 ITFG1Q8TB96 612 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 ARPC5LQ9BPX5 153 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 TRIM54Q9BYV2 358 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 SLC52A3Q9NQ40 469 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 AGPAT4Q9NRZ5 378 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 SMOXQ9NWM0 555 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 LEF1Q9UJU2 399 aaPredicted RBP10.5□□□□□ -0.73
CUX1-205ENST00000425244 MRPS23Q9Y3D9 190 aaKnown RBP10.5□□□□□ -0.73
CUX1-205ENST00000425244 A8MX80 341 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 K7ERQ8 282 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 IL12AP29459 219 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 ERVK-8P63133 956 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 NR6A1Q15406 480 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 CMTM8Q8IZV2 173 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 TTC30BQ8N4P2 665 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 KCNJ9Q92806 393 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 PPM1MQ96MI6 270 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 RBM38Q9H0Z9 239 aaKnown RBP10.5□□□□□ -0.73
CUX1-205ENST00000425244 PFDN4Q9NQP4 134 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 OLAHQ9NV23 265 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 NOTCH4Q99466 2003 aa10.5□□□□□ -0.73
CUX1-205ENST00000425244 H3BNH8 94 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 S100BP04271 92 aaPredicted RBP10.49□□□□□ -0.73
CUX1-205ENST00000425244 PRR35P0CG20 571 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 CEBPBP17676 345 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 PIK3CGP48736 1102 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 FOXM1Q08050 763 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 CDH18Q13634 790 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 AAK1Q2M2I8 961 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 TFAP2CQ92754 450 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 SAMD11Q96NU1 681 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 ADI1Q9BV57 179 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 ANKRD60Q9BZ19 345 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 ZNF711Q9Y462 761 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 DENND4CQ5VZ89 1909 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 TYW5A2RUC4 315 aaKnown RBP10.49□□□□□ -0.73
CUX1-205ENST00000425244 KLK8O60259 260 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 MOSPD3O75425 235 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 EEDO75530 441 aaKnown RBP10.49□□□□□ -0.73
CUX1-205ENST00000425244 TRIM16O95361 564 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 CD160O95971 181 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 ESR1P03372 595 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 PTGER3P43115 390 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 CLCN7P51798 805 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 DGKQP52824 942 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 ARHGAP15Q53QZ3 475 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 NANOGP8Q6NSW7 305 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 TTC33Q6PID6 262 aaPredicted RBP10.49□□□□□ -0.73
CUX1-205ENST00000425244 NCEH1Q6PIU2 408 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 CHST9Q7L1S5 443 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 SFRP1Q8N474 314 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 CLDN19Q8N6F1 224 aa10.49□□□□□ -0.73
CUX1-205ENST00000425244 VN1R2Q8NFZ6 395 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms