RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 CCDC134Q9H6E4 229 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 ALG9Q9H6U8 611 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 RDH14Q9HBH5 336 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 PARVBQ9HBI1 364 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 CYP4F12Q9HCS2 524 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 OXSMQ9NWU1 459 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 TRNAU1APQ9NX07 287 aaKnown RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 CPSF2Q9P2I0 782 aaKnown RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 KLQ9UEF7 1012 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 EIF2B4Q9UI10 523 aaKnown RBP10.13□□□□□ -0.79
MDC1-205ENST00000425072 DGKBQ9Y6T7 804 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 THADAQ6YHU6 1953 aa10.13□□□□□ -0.79
MDC1-205ENST00000425072 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 SPTY2D1-AS1A0A0U1RR47 76 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 PRSS38A1L453 326 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 WDR91A4D1P6 747 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 G3V2L1 256 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 GFYI3L273 518 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 TLR4O00206 839 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 CDC7O00311 574 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 IFRD1O00458 451 aaPredicted RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 BTN3A1O00481 513 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 KLF11O14901 512 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 SNX2O60749 519 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 IPO13O94829 963 aaKnown RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 RASGRP1O95267 797 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 MATN4O95460 622 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 TSPAN12O95859 305 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 CATP04040 527 aaKnown RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 RPN2P04844 631 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 TDGF1P13385 188 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 CTSEP14091 401 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 IMPDH1P20839 514 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 CYP2A7P20853 494 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 ALDH3A1P30838 453 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 RPIAP49247 311 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 PGGT1BP53609 377 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 GYS2P54840 703 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 DNAJB13P59910 316 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 PPARDQ03181 441 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 ABRQ12979 859 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 STX3Q13277 289 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 SP140Q13342 867 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 TEAD4Q15561 434 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 PDK4Q16654 411 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 TECRLQ5HYJ1 363 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 METTL2BQ6P1Q9 378 aaKnown RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 TSSK4Q6SA08 328 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 CRTC3Q6UUV7 619 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 ZYG11AQ6WRX3 759 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 FRA10AC1Q70Z53 315 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 UBE2R2Q712K3 238 aaPredicted RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 CHST15Q7LFX5 561 aaPredicted RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 C11orf96Q7Z7L8 435 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 TMEFF1Q8IYR6 380 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 SLC22A15Q8IZD6 547 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 TCAIMQ8N3R3 496 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 DEFB119Q8N690 84 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 TMEM105Q8N8V8 129 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 GIMAP7Q8NHV1 300 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 ZNF75CPQ92670 426 aaPredicted RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 CCDC97Q96F63 343 aaPredicted RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 CNDP1Q96KN2 507 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 HSPA12BQ96MM6 686 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 MIR1-1HGQ9H1L0 117 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 COG4Q9H9E3 785 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 CARS2Q9HA77 564 aaKnown RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 MLXIPLQ9NP71 852 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 KLC4Q9NSK0 619 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 XPR1Q9UBH6 696 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 EMCNQ9ULC0 261 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 SUFUQ9UMX1 484 aa10.12□□□□□ -0.79
MDC1-205ENST00000425072 TNPO3Q9Y5L0 923 aaKnown RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 PTPRZ1P23471 2315 aaPredicted RBP10.12□□□□□ -0.79
MDC1-205ENST00000425072 GMNCA6NCL1 334 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 FAM86C2PA6NEL3 165 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 BCAT2O15382 392 aaPredicted RBP10.11□□□□□ -0.79
MDC1-205ENST00000425072 KDM1AO60341 852 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 DLX3O60479 287 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 FUCA1P04066 466 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 ANXA5P08758 320 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 GFAPP14136 432 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 PBLDP30039 288 aaPredicted RBP10.11□□□□□ -0.79
MDC1-205ENST00000425072 SERPINB5P36952 375 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 GNPDA1P46926 289 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 KCNC1P48547 511 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 HNMTP50135 292 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 AFF3P51826 1226 aaKnown RBP10.11□□□□□ -0.79
MDC1-205ENST00000425072 AP1S2P56377 157 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 GNGT1P63211 74 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 CDKL1Q00532 357 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 OR4D1Q15615 310 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 TSNQ15631 228 aaKnown RBP10.11□□□□□ -0.79
MDC1-205ENST00000425072 CFAP157Q5JU67 520 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 LIPMQ5VYY2 423 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 SULT1C3Q6IMI6 304 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 UNC5DQ6UXZ4 953 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 WASH2PQ6VEQ5 465 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 RGS9BPQ6ZS82 235 aa10.11□□□□□ -0.79
MDC1-205ENST00000425072 RD3Q7Z3Z2 195 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms