RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 PDHA2P29803 388 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 PRDX3P30048 256 aaKnown RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 OTX2P32243 289 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 CBSP35520 551 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 DCTP40126 519 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 PREPP48147 710 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 MARCKSL1P49006 195 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 CDKN1CP49918 316 aaPredicted RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 VAV2P52735 878 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 XIAPP98170 497 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 PRKG2Q13237 762 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 KRT33BQ14525 404 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 SLC9A5Q14940 896 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 KYNUQ16719 465 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 DEFB110Q30KQ9 67 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 TMTC4Q5T4D3 741 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 C1orf189Q5VU69 101 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 CYB5D1Q6P9G0 228 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 SPOCD1Q6ZMY3 1216 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 CDHR3Q6ZTQ4 885 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 TRIM73Q86UV7 250 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 BPHLQ86WA6 291 aaPredicted RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 SYTL1Q8IYJ3 562 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 OR4K2Q8NGD2 314 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 OR13C4Q8NGS5 318 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 OR2L2Q8NH16 312 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 SNRNP40Q96DI7 357 aaKnown RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 FCRL5Q96RD9 977 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 FERD3LQ96RJ6 166 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 CD180Q99467 661 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 FAM118BQ9BPY3 351 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 HEMGNQ9BXL5 484 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 NLNQ9BYT8 704 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 XPO4Q9C0E2 1151 aaKnown RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 SPRTNQ9H040 489 aaPredicted RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 DEF6Q9H4E7 631 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 TRABDQ9H4I3 376 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 ASB8Q9H765 288 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 ACTR5Q9H9F9 607 aaPredicted RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 ZBTB20Q9HC78 741 aaPredicted RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 ASF1BQ9NVP2 202 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 POMT2Q9UKY4 750 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 TFR2Q9UP52 801 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 BTRCQ9Y297 605 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 PKP3Q9Y446 797 aa7.87□□□□□ -1.15
VIM-202ENST00000421459 DNMT3AQ9Y6K1 912 aaPredicted RBP7.87□□□□□ -1.15
VIM-202ENST00000421459 CCDC66A2RUB6 948 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 BTN3A1O00481 513 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 STX7O15400 261 aaKnown RBP7.86□□□□□ -1.15
VIM-202ENST00000421459 ZNF749O43361 778 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 LDB2O43679 373 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 AKR1B10O60218 316 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 DPM1O60762 260 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 CNOT3O75175 753 aaKnown RBP7.86□□□□□ -1.15
VIM-202ENST00000421459 SRP72O76094 671 aaKnown RBP7.86□□□□□ -1.15
VIM-202ENST00000421459 CBX6O95503 412 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 RAB40ALP0C0E4 278 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 SLC35G4P0C7Q5 338 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 CYP2A7P20853 494 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 RBL1P28749 1068 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 ARHGAP25P42331 645 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 GSDMDP57764 484 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 ITGA9Q13797 1035 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 SPARCL1Q14515 664 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 ZIC1Q15915 447 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 TAZQ16635 292 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 LONRF2Q1L5Z9 754 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 MLIPQ5VWP3 458 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 NAPRTQ6XQN6 538 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 CCDC50Q8IVM0 306 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 LMNTD1Q8N9Z9 388 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 GLIS1Q8NBF1 620 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 OR8K1Q8NGG5 319 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 OR52E1Q8NGJ3 308 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 LCN9Q8WX39 176 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 SEC14L1Q92503 715 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 CPT1BQ92523 772 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 INPP5DQ92835 1189 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 TRAPPC9Q96Q05 1148 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 SRPK1Q96SB4 655 aaKnown RBP7.86□□□□□ -1.15
VIM-202ENST00000421459 DNAJC7Q99615 494 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 ZCCHC2Q9C0B9 1178 aaKnown RBP7.86□□□□□ -1.15
VIM-202ENST00000421459 SRMSQ9H3Y6 488 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 FAM60AQ9NP50 221 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 LATS2Q9NRM7 1088 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 GPR83Q9NYM4 423 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 RSPH14Q9UHP6 348 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 ACSL5Q9ULC5 683 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 NTNG1Q9Y2I2 539 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 UNC79Q9P2D8 2635 aa7.86□□□□□ -1.15
VIM-202ENST00000421459 hCG_1818297A0A087WSY0 165 aa7.85□□□□□ -1.15
VIM-202ENST00000421459 SSU72P8A0A1W2PR75 194 aa7.85□□□□□ -1.15
VIM-202ENST00000421459 SPOPO43791 374 aa7.85□□□□□ -1.15
VIM-202ENST00000421459 ALOX12BO75342 701 aa7.85□□□□□ -1.15
VIM-202ENST00000421459 KLF7O75840 302 aaPredicted RBP7.85□□□□□ -1.15
VIM-202ENST00000421459 LDLRP01130 860 aa7.85□□□□□ -1.15
VIM-202ENST00000421459 EPOP01588 193 aa7.85□□□□□ -1.15
VIM-202ENST00000421459 TPBGLP0DKB5 382 aa7.85□□□□□ -1.15
VIM-202ENST00000421459 ADRA1AP35348 466 aa7.85□□□□□ -1.15
VIM-202ENST00000421459 NR2C2P49116 596 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms