RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 IQCF5A8MTL0 148 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 AXIN1O15169 862 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 DFNA5O60443 496 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 NTRK1P04629 796 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 POLR2EP19388 210 aaKnown RBP11.53□□□□□ -0.56
DDR1-232ENST00000418800 IGFBP5P24593 272 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 WEE1P30291 646 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 BMPR1AP36894 532 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 GP2P55259 537 aaKnown RBP11.53□□□□□ -0.56
DDR1-232ENST00000418800 HERVK_113P63132 956 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 RAD51Q06609 339 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 EFEMP1Q12805 493 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 RBM48Q5RL73 367 aaKnown RBP11.53□□□□□ -0.56
DDR1-232ENST00000418800 LYPD8Q6UX82 237 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 ISCA2Q86U28 154 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 C7orf57Q8NEG2 295 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 PMEPA1Q969W9 287 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 ZUFSPQ96AP4 578 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 GPR78Q96P69 363 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 SMIM14Q96QK8 99 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 GMLQ99445 158 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 PHOX2BQ99453 314 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 ERVK-6Q9BXR3 956 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 CATSPERBQ9H7T0 1116 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 HTTP42858 3142 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 PTPRFP10586 1907 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 UPK3BL1B0FP48 263 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 UPK3BL2E5RIL1 263 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 I6L893 689 aaPredicted RBP11.53□□□□□ -0.56
DDR1-232ENST00000418800 CD3EAPO15446 510 aaKnown RBP11.53□□□□□ -0.56
DDR1-232ENST00000418800 HOXC11O43248 304 aaPredicted RBP11.53□□□□□ -0.56
DDR1-232ENST00000418800 G6PDP11413 515 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 VGLL4Q14135 290 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 PTGR1Q14914 329 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 OR4D1Q15615 310 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 CTU2Q2VPK5 515 aaKnown RBP11.53□□□□□ -0.56
DDR1-232ENST00000418800 ATAD3CQ5T2N8 411 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 FKBP1CQ5VVH2 108 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 RBM23Q86U06 439 aaKnown RBP11.53□□□□□ -0.56
DDR1-232ENST00000418800 DTWD1Q8N5C7 304 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 MINDY2Q8NBR6 621 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 MTERF3Q96E29 417 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 UGT2B28Q9BY64 529 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 DPY30Q9C005 99 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 ABCB9Q9NP78 766 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 PKP3Q9Y446 797 aa11.53□□□□□ -0.56
DDR1-232ENST00000418800 NINQ8N4C6 2090 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 A0A1W2PP18 115 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 PRMT5O14744 637 aaPredicted RBP11.52□□□□□ -0.56
DDR1-232ENST00000418800 UPK1BO75841 260 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 KCNK2O95069 426 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 CPSF4O95639 269 aaKnown RBP11.52□□□□□ -0.56
DDR1-232ENST00000418800 F9P00740 461 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 PRKCAP17252 672 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 DAOAP59103 153 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 GALNT2Q10471 571 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 GRSF1Q12849 480 aaKnown RBP eCLIP11.52□□□□□ -0.561e-5■□□□□ 8.9
DDR1-232ENST00000418800 CLCA4Q14CN2 919 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 FAM174BQ3ZCQ3 159 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 PRAMEF19Q5SWL8 479 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 CCSAPQ6IQ19 270 aaPredicted RBP11.52□□□□□ -0.56
DDR1-232ENST00000418800 LYSMD2Q8IV50 215 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 PELI3Q8N2H9 469 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 ATP6V0D2Q8N8Y2 350 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 LEMD2Q8NC56 503 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 OR5H6Q8NGV6 325 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 STAG3L4Q8TBR4 150 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 PHF21AQ96BD5 680 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 C12orf42Q96LP6 360 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 TDRD1Q9BXT4 1180 aaKnown RBP11.52□□□□□ -0.56
DDR1-232ENST00000418800 MMP28Q9H239 520 aa11.52□□□□□ -0.56
DDR1-232ENST00000418800 RCOR3Q9P2K3 495 aaPredicted RBP11.52□□□□□ -0.56
DDR1-232ENST00000418800 NUFIP1Q9UHK0 495 aaKnown RBP11.52□□□□□ -0.56
DDR1-232ENST00000418800 TRMT6Q9UJA5 497 aaKnown RBP11.52□□□□□ -0.56
DDR1-232ENST00000418800 BBIP1A8MTZ0 92 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 SH3BP5O60239 455 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 OR4Q2P0C623 313 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 MSH3P20585 1137 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 CXCR2P25025 360 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 AKT1P31749 480 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 OAZ1P54368 228 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 PWP1Q13610 501 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 MED22Q15528 200 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 C18orf21Q32NC0 220 aaPredicted RBP11.52□□□□□ -0.57
DDR1-232ENST00000418800 GTDC1Q4AE62 458 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 ZNF484Q5JVG2 852 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 GPR153Q6NV75 609 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 ZNF544Q6NX49 715 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 PLPPR4Q7Z2D5 763 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 METTL4Q8N3J2 472 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 STX19Q8N4C7 294 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 PTCD2Q8WV60 388 aaKnown RBP11.52□□□□□ -0.57
DDR1-232ENST00000418800 PIK3R3Q92569 461 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 CENPIQ92674 756 aaPredicted RBP11.52□□□□□ -0.57
DDR1-232ENST00000418800 TMEM125Q96AQ2 219 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 DOK1Q99704 481 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 SMAD5Q99717 465 aaKnown RBP11.52□□□□□ -0.57
DDR1-232ENST00000418800 SMOC2Q9H3U7 446 aa11.52□□□□□ -0.57
DDR1-232ENST00000418800 AGO3Q9H9G7 860 aaKnown RBP11.52□□□□□ -0.57
DDR1-232ENST00000418800 AKIP1Q9NQ31 210 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms