RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 DENND6BQ8NEG7 585 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 SLC12A9Q9BXP2 914 aa20.37■□□□□ 0.85
CASC3-203ENST00000418132 LRRC14BA6NHZ5 514 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 GPR89AB7ZAQ6 455 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 GFYI3L273 518 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 LIN7AO14910 233 aaPredicted RBP20.36■□□□□ 0.85
CASC3-203ENST00000418132 SLC16A5O15375 505 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 SLC31A1O15431 190 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 GPR89BP0CG08 455 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 MYCLP1P12525 358 aaPredicted RBP20.36■□□□□ 0.85
CASC3-203ENST00000418132 VCLP18206 1134 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 EEF1DP29692 281 aaKnown RBP20.36■□□□□ 0.85
CASC3-203ENST00000418132 RPL14P50914 215 aaKnown RBP20.36■□□□□ 0.85
CASC3-203ENST00000418132 HK2P52789 917 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 NAA20P61599 178 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 SP140Q13342 867 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 FBXW10Q5XX13 1052 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 DOK6Q6PKX4 331 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 LILRA3Q8N6C8 439 aaPredicted RBP20.36■□□□□ 0.85
CASC3-203ENST00000418132 TSTD1Q8NFU3 115 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 FOXJ1Q92949 421 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 TMEM120AQ9BXJ8 343 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 EML4Q9HC35 981 aaKnown RBP20.36■□□□□ 0.85
CASC3-203ENST00000418132 FAM8A1Q9UBU6 413 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 ZDHHC2Q9UIJ5 367 aa20.36■□□□□ 0.85
CASC3-203ENST00000418132 POP7O75817 140 aaKnown RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 MATN4O95460 622 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 SEMA4FO95754 770 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 ENO2P09104 434 aaPredicted RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 PBLDP30039 288 aaPredicted RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 AQP5P55064 265 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 CDKL4Q5MAI5 379 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 ANKS6Q68DC2 871 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 XKR5Q6UX68 686 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 UBE2R2Q712K3 238 aaPredicted RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 PACS2Q86VP3 889 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 SLC22A15Q8IZD6 547 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 GBP7Q8N8V2 638 aaPredicted RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 OR2L2Q8NH16 312 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 ASB2Q96Q27 587 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 TBC1D17Q9HA65 648 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 FZD3Q9NPG1 666 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 PTBP2Q9UKA9 531 aaKnown RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 PCYT1BQ9Y5K3 369 aaPredicted RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 ZNF195O14628 629 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 HGSO14964 777 aaPredicted RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 LATO43561 262 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 DNAJC8O75937 253 aaPredicted RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 S100BP04271 92 aaPredicted RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 PREPP48147 710 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 AGTR2P50052 363 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 ARHGAP8P85298 464 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 CRTC3Q6UUV7 619 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 SKA2Q8WVK7 121 aaPredicted RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 COG4Q9H9E3 785 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 PARVBQ9HBI1 364 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 PDE10AQ9Y233 779 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 DNMT3AQ9Y6K1 912 aaPredicted RBP20.35■□□□□ 0.85
CASC3-203ENST00000418132 COL6A3P12111 3177 aa20.35■□□□□ 0.85
CASC3-203ENST00000418132 MGAT4DA6NG13 374 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 CDKL1Q00532 357 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 PLOD1Q02809 727 aaPredicted RBP20.34■□□□□ 0.85
CASC3-203ENST00000418132 PCBP2Q15366 365 aaKnown RBP eCLIP20.34■□□□□ 0.85
CASC3-203ENST00000418132 MAVSQ7Z434 540 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 LRRTM4Q86VH4 590 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 HM13Q8TCT9 377 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 ZNF483Q8TF39 744 aaPredicted RBP20.34■□□□□ 0.85
CASC3-203ENST00000418132 CLDN23Q96B33 292 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 HHIPQ96QV1 700 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 APOOQ9BUR5 198 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 SHCBP1LQ9BZQ2 653 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 STN1Q9H668 368 aaKnown RBP20.34■□□□□ 0.85
CASC3-203ENST00000418132 PCTPQ9UKL6 214 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 TNPO3Q9Y5L0 923 aaKnown RBP20.34■□□□□ 0.85
CASC3-203ENST00000418132 MATN2O00339 956 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 UBFD1O14562 309 aaKnown RBP20.34■□□□□ 0.85
CASC3-203ENST00000418132 GUCA1CO95843 209 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 RPIAP49247 311 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 CDH13P55290 713 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 BNIP1Q12981 228 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 FBXO48Q5FWF7 155 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 SULT1C3Q6IMI6 304 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 CUZD1Q86UP6 607 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 CFAP206Q8IYR0 622 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 OXR1Q8N573 874 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 AGR3Q8TD06 166 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 RHBDF1Q96CC6 855 aa20.34■□□□□ 0.85
CASC3-203ENST00000418132 NSUN5Q96P11 429 aaKnown RBP20.34■□□□□ 0.85
CASC3-203ENST00000418132 SLCO1B7G3V0H7 640 aa20.33■□□□□ 0.84
CASC3-203ENST00000418132 E2F3O00716 465 aa20.33■□□□□ 0.84
CASC3-203ENST00000418132 PSIP1O75475 530 aaKnown RBP20.33■□□□□ 0.84
CASC3-203ENST00000418132 HOXC4P09017 264 aaPredicted RBP20.33■□□□□ 0.84
CASC3-203ENST00000418132 HNRNPA2B1P22626 353 aaKnown RBP20.33■□□□□ 0.84
CASC3-203ENST00000418132 PDHA2P29803 388 aa20.33■□□□□ 0.84
CASC3-203ENST00000418132 OXTRP30559 389 aa20.33■□□□□ 0.84
CASC3-203ENST00000418132 MAPK9P45984 424 aa20.33■□□□□ 0.84
CASC3-203ENST00000418132 CLCQ05315 142 aa20.33■□□□□ 0.84
CASC3-203ENST00000418132 PJA1Q8NG27 643 aa20.33■□□□□ 0.84
CASC3-203ENST00000418132 MYOCQ99972 504 aa20.33■□□□□ 0.84
CASC3-203ENST00000418132 TRIM54Q9BYV2 358 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms