RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 AASSQ9UDR5 926 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 FBXO10Q9UK96 956 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 KRBA1A5PL33 1030 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 GLTPD2A6NH11 291 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 OR6C75A6NL08 312 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 CFAP99D6REC4 459 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 TBC1D4O60343 1298 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 OTCP00480 354 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 G6PDP11413 515 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 IL1RNP18510 177 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 HTR1BP28222 390 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 MTHFRP42898 656 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 MTPNP58546 118 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 TAF10Q12962 218 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 MRPL58Q14197 206 aaKnown RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 KIAA0040Q15053 153 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 CTSL3PQ5NE16 218 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 GLB1LQ6UWU2 654 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 LINC00299Q6ZSB3 139 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 RBM23Q86U06 439 aaKnown RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 FAM126BQ8IXS8 530 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 RNF168Q8IYW5 571 aaPredicted RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 ABI1Q8IZP0 508 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 LGI2Q8N0V4 545 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 C2orf69Q8N8R5 385 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 GLB1L3Q8NCI6 653 aaPredicted RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 ABHD11Q8NFV4 315 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 CEP295NLQ96MC4 621 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 CDK5RAP1Q96SZ6 601 aaKnown RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 HEPHQ9BQS7 1158 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 DGCR6LQ9BY27 220 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 ADNPQ9H2P0 1102 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 ACTL8Q9H568 366 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 SCUBE2Q9NQ36 999 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 FAM118AQ9NWS6 357 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 PAK1IP1Q9NWT1 392 aaPredicted RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 EIF2B4Q9UI10 523 aaKnown RBP9.64□□□□□ -0.87
CD44-206ENST00000415148 DHRS7Q9Y394 339 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 NEUROG3Q9Y4Z2 214 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 PCDHGA8Q9Y5G5 932 aa9.64□□□□□ -0.87
CD44-206ENST00000415148 A0A0D9SEW6 157 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 E5RI56 91 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 INMTO95050 263 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 SCELO95171 688 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 CAPN1P07384 714 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 HMBSP08397 361 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ZDHHC11BP0C7U3 371 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 CDH3P22223 829 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ALDH4A1P30038 563 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 MC4RP32245 332 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 IL18R1Q13478 541 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 AP5B1Q2VPB7 878 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 SULT1C3Q6IMI6 304 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 PSAPL1Q6NUJ1 521 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 LETMD1Q6P1Q0 360 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 METTL2BQ6P1Q9 378 aaKnown RBP9.63□□□□□ -0.87
CD44-206ENST00000415148 IL27RAQ6UWB1 636 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ADAMTSL2Q86TH1 951 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 STK32CQ86UX6 486 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 SPARTQ8N0X7 666 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ABHD8Q96I13 439 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 PPM1MQ96MI6 270 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 CDK15Q96Q40 435 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 MBOAT4Q96T53 435 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ZBTB18Q99592 522 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 RBM4BQ9BQ04 359 aaKnown RBP9.63□□□□□ -0.87
CD44-206ENST00000415148 RBM4Q9BWF3 364 aaKnown RBP9.63□□□□□ -0.87
CD44-206ENST00000415148 AMBRA1Q9C0C7 1298 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 P2RY12Q9H244 342 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 TOR3AQ9H497 397 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 MAGIXQ9H6Y5 334 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 EIF3LQ9Y262 564 aaKnown RBP9.63□□□□□ -0.87
CD44-206ENST00000415148 INVSQ9Y283 1065 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 PCDHB1Q9Y5F3 818 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ACTL7AQ9Y615 435 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 CHD5Q8TDI0 1954 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ANKRD66B4E2M5 251 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 SLC28A1O00337 649 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 OR7A17O14581 309 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 GSTA4O15217 222 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ACSL4O60488 711 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 NIPSNAP2O75323 286 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 BCAS1O75363 584 aaPredicted RBP9.63□□□□□ -0.87
CD44-206ENST00000415148 CLPXO76031 633 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 S100BP04271 92 aaPredicted RBP9.63□□□□□ -0.87
CD44-206ENST00000415148 AKT1P31749 480 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 CDKN1CP49918 316 aaPredicted RBP9.63□□□□□ -0.87
CD44-206ENST00000415148 CLCN7P51798 805 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 SMARCB1Q12824 385 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 GTF2H2Q13888 395 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 VARS2Q5ST30 1063 aaKnown RBP9.63□□□□□ -0.87
CD44-206ENST00000415148 C6orf141Q5SZD1 244 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 GTF2H2CQ6P1K8 395 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ENPP6Q6UWR7 440 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 GOLGA7Q7Z5G4 137 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 ZNF280BQ86YH2 543 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 PIANPQ8IYJ0 282 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 TRPV1Q8NER1 839 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 OR2T12Q8NG77 320 aa9.63□□□□□ -0.87
CD44-206ENST00000415148 OR52B6Q8NGF0 335 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms