RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SAC3D1A6NKF1 404 aa2.54□□□□□ -2
MCF2-204ENST00000414978 C3orf70A6NLC5 250 aaPredicted RBP2.54□□□□□ -2
MCF2-204ENST00000414978 NPIPB11E5RHQ5 1161 aa2.54□□□□□ -2
MCF2-204ENST00000414978 NPIPB6E9PJ23 425 aa2.54□□□□□ -2
MCF2-204ENST00000414978 VCYO14598 125 aa2.54□□□□□ -2
MCF2-204ENST00000414978 GPC4O75487 556 aa2.54□□□□□ -2
MCF2-204ENST00000414978 NDUFS3O75489 264 aa2.54□□□□□ -2
MCF2-204ENST00000414978 KRT8P05787 483 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ADRA2CP18825 462 aa2.54□□□□□ -2
MCF2-204ENST00000414978 TYMPP19971 482 aa2.54□□□□□ -2
MCF2-204ENST00000414978 SPINK2P20155 84 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ACO1P21399 889 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 WNT5AP41221 380 aa2.54□□□□□ -2
MCF2-204ENST00000414978 HTR6P50406 440 aa2.54□□□□□ -2
MCF2-204ENST00000414978 RABGGTBP53611 331 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ATXN3P54252 364 aaPredicted RBP2.54□□□□□ -2
MCF2-204ENST00000414978 ALCAMQ13740 583 aa2.54□□□□□ -2
MCF2-204ENST00000414978 MVPQ14764 893 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 RNPS1Q15287 305 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 METRNLQ641Q3 311 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ATG9BQ674R7 924 aa2.54□□□□□ -2
MCF2-204ENST00000414978 FBXO42Q6P3S6 717 aa2.54□□□□□ -2
MCF2-204ENST00000414978 NOTUMQ6P988 496 aa2.54□□□□□ -2
MCF2-204ENST00000414978 GJB7Q6PEY0 223 aa2.54□□□□□ -2
MCF2-204ENST00000414978 Q6ZWC4 215 aa2.54□□□□□ -2
MCF2-204ENST00000414978 MDGA2Q7Z553 956 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ITPRIPQ8IWB1 547 aa2.54□□□□□ -2
MCF2-204ENST00000414978 REXO1L1PQ8IX06 675 aa2.54□□□□□ -2
MCF2-204ENST00000414978 POU5F2Q8N7G0 328 aa2.54□□□□□ -2
MCF2-204ENST00000414978 KIAA0895Q8NCT3 520 aa2.54□□□□□ -2
MCF2-204ENST00000414978 OR52L2PQ8NGH6 319 aa2.54□□□□□ -2
MCF2-204ENST00000414978 OR52M1Q8NGK5 317 aa2.54□□□□□ -2
MCF2-204ENST00000414978 MBD6Q96DN6 1003 aa2.54□□□□□ -2
MCF2-204ENST00000414978 RBM14Q96PK6 669 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 SIGLEC11Q96RL6 698 aa2.54□□□□□ -2
MCF2-204ENST00000414978 SLC7A5P2Q9GIP4 190 aa2.54□□□□□ -2
MCF2-204ENST00000414978 HIPK3Q9H422 1215 aa2.54□□□□□ -2
MCF2-204ENST00000414978 CLIP2Q9UDT6 1046 aa2.54□□□□□ -2
MCF2-204ENST00000414978 RCOR1Q9UKL0 485 aa2.54□□□□□ -2
MCF2-204ENST00000414978 MROH5Q6ZUA9 1318 aa2.54□□□□□ -2
MCF2-204ENST00000414978 C5orf51A6NDU8 294 aa2.54□□□□□ -2
MCF2-204ENST00000414978 LRRC72A6NJI9 287 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ANGPT2O15123 496 aa2.54□□□□□ -2
MCF2-204ENST00000414978 SERPINC1P01008 464 aa2.54□□□□□ -2
MCF2-204ENST00000414978 TNNT1P13805 278 aa2.54□□□□□ -2
MCF2-204ENST00000414978 GMFBP60983 142 aa2.54□□□□□ -2
MCF2-204ENST00000414978 FOLH1Q04609 750 aa2.54□□□□□ -2
MCF2-204ENST00000414978 MSLNQ13421 630 aaPredicted RBP2.54□□□□□ -2
MCF2-204ENST00000414978 NAE1Q13564 534 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ZNF124Q15973 351 aa2.54□□□□□ -2
MCF2-204ENST00000414978 FAM98BQ52LJ0 330 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 TMEM268Q5VZI3 342 aa2.54□□□□□ -2
MCF2-204ENST00000414978 RAD9BQ6WBX8 426 aa2.54□□□□□ -2
MCF2-204ENST00000414978 PRSS45Q7RTY3 260 aa2.54□□□□□ -2
MCF2-204ENST00000414978 TMEM173Q86WV6 379 aaPredicted RBP2.54□□□□□ -2
MCF2-204ENST00000414978 ELMOD2Q8IZ81 293 aa2.54□□□□□ -2
MCF2-204ENST00000414978 RASGEF1AQ8N9B8 481 aa2.54□□□□□ -2
MCF2-204ENST00000414978 NHLRC2Q8NBF2 726 aa2.54□□□□□ -2
MCF2-204ENST00000414978 KLHDC9Q8NEP7 349 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ATP6V0A1Q93050 837 aa2.54□□□□□ -2
MCF2-204ENST00000414978 WDR83Q9BRX9 315 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 IDI2Q9BXS1 227 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ABCG8Q9H221 673 aa2.54□□□□□ -2
MCF2-204ENST00000414978 TCF7L2Q9NQB0 619 aa2.54□□□□□ -2
MCF2-204ENST00000414978 OSER1Q9NX31 292 aa2.54□□□□□ -2
MCF2-204ENST00000414978 HYPKQ9NX55 129 aa2.54□□□□□ -2
MCF2-204ENST00000414978 GDE1Q9NZC3 331 aa2.54□□□□□ -2
MCF2-204ENST00000414978 HCN3Q9P1Z3 774 aa2.54□□□□□ -2
MCF2-204ENST00000414978 IPO11Q9UI26 975 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 HOOK1Q9UJC3 728 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 DDX19BQ9UMR2 479 aa2.54□□□□□ -2
MCF2-204ENST00000414978 EXOC7Q9UPT5 735 aa2.54□□□□□ -2
MCF2-204ENST00000414978 BTBD3Q9Y2F9 522 aa2.54□□□□□ -2
MCF2-204ENST00000414978 KCTD3Q9Y597 815 aa2.54□□□□□ -2
MCF2-204ENST00000414978 MROH7-TTC4A0A0A0MT08 1334 aa2.54□□□□□ -2
MCF2-204ENST00000414978 TMEM8BA6NDV4 472 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ZBTB43O43298 467 aa2.54□□□□□ -2
MCF2-204ENST00000414978 TXNL1O43396 289 aa2.54□□□□□ -2
MCF2-204ENST00000414978 NUAK1O60285 661 aa2.54□□□□□ -2
MCF2-204ENST00000414978 CREG1O75629 220 aa2.54□□□□□ -2
MCF2-204ENST00000414978 SLITRK3O94933 977 aa2.54□□□□□ -2
MCF2-204ENST00000414978 PDGFBP01127 241 aaPredicted RBP2.54□□□□□ -2
MCF2-204ENST00000414978 CBSLP0DN79 551 aa2.54□□□□□ -2
MCF2-204ENST00000414978 ETFAP13804 333 aa2.54□□□□□ -2
MCF2-204ENST00000414978 EPORP19235 508 aa2.54□□□□□ -2
MCF2-204ENST00000414978 FUT1P19526 365 aa2.54□□□□□ -2
MCF2-204ENST00000414978 CCND3P30281 292 aaPredicted RBP2.54□□□□□ -2
MCF2-204ENST00000414978 CBSP35520 551 aa2.54□□□□□ -2
MCF2-204ENST00000414978 OR1G1P47890 313 aa2.54□□□□□ -2
MCF2-204ENST00000414978 CLK3P49761 638 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 EEFSECP57772 596 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 CYP4F2P78329 520 aa2.54□□□□□ -2
MCF2-204ENST00000414978 SLC25A3Q00325 362 aa2.54□□□□□ -2
MCF2-204ENST00000414978 INSM1Q01101 510 aaPredicted RBP2.54□□□□□ -2
MCF2-204ENST00000414978 GCNT1Q02742 428 aa2.54□□□□□ -2
MCF2-204ENST00000414978 BMPR2Q13873 1038 aa2.54□□□□□ -2
MCF2-204ENST00000414978 PDK1Q15118 436 aa2.54□□□□□ -2
MCF2-204ENST00000414978 SMN1Q16637 294 aaKnown RBP2.54□□□□□ -2
MCF2-204ENST00000414978 LRRC73Q5JTD7 316 aa2.54□□□□□ -2
MCF2-204ENST00000414978 SPDYCQ5MJ68 293 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms