RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 GRAMD1BQ3KR37 738 aa24.08■■□□□ 1.44
VRK2-202ENST00000412104 C12orf40Q86WS4 652 aa24.08■■□□□ 1.44
VRK2-202ENST00000412104 PLCD3Q8N3E9 789 aa24.08■■□□□ 1.44
VRK2-202ENST00000412104 RSPRY1Q96DX4 576 aa24.08■■□□□ 1.44
VRK2-202ENST00000412104 EBF3Q9H4W6 596 aa24.08■■□□□ 1.44
VRK2-202ENST00000412104 COPS7BQ9H9Q2 264 aaPredicted RBP24.08■■□□□ 1.44
VRK2-202ENST00000412104 PIDD1Q9HB75 910 aa24.08■■□□□ 1.44
VRK2-202ENST00000412104 HEBP1Q9NRV9 189 aa24.08■■□□□ 1.44
VRK2-202ENST00000412104 DPP7Q9UHL4 492 aa24.08■■□□□ 1.44
VRK2-202ENST00000412104 ASPDHA6ND91 283 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 MTX2O75431 263 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 ANXA5P08758 320 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 ETV3P41162 512 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 MRPS35P82673 323 aaKnown RBP24.07■■□□□ 1.44
VRK2-202ENST00000412104 HSPA14Q0VDF9 509 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 NR6A1Q15406 480 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 Q6ZVL8 140 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 TMEM126BQ8IUX1 230 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 LILRA2Q8N149 483 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 ZNF366Q8N895 744 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 OSCP1Q8WVF1 389 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 VPS33AQ96AX1 596 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 LRRC58Q96CX6 371 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 DCUN1D1Q96GG9 259 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 LRGUKQ96M69 825 aa24.07■■□□□ 1.44
VRK2-202ENST00000412104 GMPR2Q9P2T1 348 aaKnown RBP24.07■■□□□ 1.44
VRK2-202ENST00000412104 DNAJA2O60884 412 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 SRPRAP08240 638 aaKnown RBP24.06■■□□□ 1.44
VRK2-202ENST00000412104 NFKBIAP25963 317 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 RPIAP49247 311 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 VASPP50552 380 aaPredicted RBP24.06■■□□□ 1.44
VRK2-202ENST00000412104 CAPRIN1Q14444 709 aaKnown RBP24.06■■□□□ 1.44
VRK2-202ENST00000412104 ZNF805Q5CZA5 627 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 SMG7Q92540 1137 aaKnown RBP24.06■■□□□ 1.44
VRK2-202ENST00000412104 PPP2R3CQ969Q6 453 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 MTIF3Q9H2K0 278 aaKnown RBP24.06■■□□□ 1.44
VRK2-202ENST00000412104 SUN2Q9UH99 717 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 PDE10AQ9Y233 779 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 NUAK1O60285 661 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 EEDO75530 441 aaKnown RBP24.06■■□□□ 1.44
VRK2-202ENST00000412104 IL12AP29459 219 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 POLR2JP52435 117 aaKnown RBP24.06■■□□□ 1.44
VRK2-202ENST00000412104 EMX2Q04743 252 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 FOXM1Q08050 763 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 BOP1Q14137 746 aaKnown RBP24.06■■□□□ 1.44
VRK2-202ENST00000412104 POM121L1PQ3SYA9 428 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 SERPINA13PQ6UXR4 307 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 UBE2R2Q712K3 238 aaPredicted RBP24.06■■□□□ 1.44
VRK2-202ENST00000412104 ADGRD2Q7Z7M1 963 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 SLC15A3Q8IY34 581 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 WFIKKN2Q8TEU8 576 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 NTMT1Q9BV86 223 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 ARL15Q9NXU5 204 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 DTNAQ9Y4J8 743 aa24.06■■□□□ 1.44
VRK2-202ENST00000412104 CCDC154A6NI56 674 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 HOXC11O43248 304 aaPredicted RBP24.05■■□□□ 1.44
VRK2-202ENST00000412104 STK16O75716 305 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 ASLP04424 464 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 EPB42P16452 691 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 MSH3P20585 1137 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 SLC6A2P23975 617 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 RHDQ02161 417 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 CDKL4Q5MAI5 379 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 RARS2Q5T160 578 aaKnown RBP24.05■■□□□ 1.44
VRK2-202ENST00000412104 HENMT1Q5T8I9 393 aaKnown RBP24.05■■□□□ 1.44
VRK2-202ENST00000412104 DPPA4Q7L190 304 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 VRK3Q8IV63 474 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 C12orf76Q8N812 135 aaPredicted RBP24.05■■□□□ 1.44
VRK2-202ENST00000412104 PROKR1Q8TCW9 393 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 LRIG1Q96JA1 1093 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 PKP2Q99959 881 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 TMEM45AQ9NWC5 275 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 DKK3Q9UBP4 350 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 TRPS1Q9UHF7 1281 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 CCL27Q9Y4X3 112 aa24.05■■□□□ 1.44
VRK2-202ENST00000412104 FAM234BA2RU67 622 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 CFAP99D6REC4 459 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 FFAR3O14843 346 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 GPR42O15529 346 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 ADH1CP00326 375 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 C8GP07360 202 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 ENO2P09104 434 aaPredicted RBP24.04■■□□□ 1.44
VRK2-202ENST00000412104 EBLN1P0CF75 366 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 XPAP23025 273 aaPredicted RBP24.04■■□□□ 1.44
VRK2-202ENST00000412104 VIPR2P41587 438 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 PIK3CGP48736 1102 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 NFYCQ13952 458 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 TIGD2Q4W5G0 525 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 IL23RQ5VWK5 629 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 CYP2R1Q6VVX0 501 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 TRAM1L1Q8N609 369 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 SKA2Q8WVK7 121 aaPredicted RBP24.04■■□□□ 1.44
VRK2-202ENST00000412104 RIOK2Q9BVS4 552 aaKnown RBP24.04■■□□□ 1.44
VRK2-202ENST00000412104 SLC12A9Q9BXP2 914 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 CMTM6Q9NX76 183 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 NFKBIL1Q9UBC1 381 aaPredicted RBP24.04■■□□□ 1.44
VRK2-202ENST00000412104 LEF1Q9UJU2 399 aaPredicted RBP24.04■■□□□ 1.44
VRK2-202ENST00000412104 RNF11Q9Y3C5 154 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 LAMA3Q16787 3333 aa24.04■■□□□ 1.44
VRK2-202ENST00000412104 TCRBV3S1A0A5B6 114 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms