RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 TMED2Q15363 201 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 AMZ1Q400G9 498 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 CDCP2Q5VXM1 449 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 ZNF449Q6P9G9 518 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 TMEM26Q6ZUK4 368 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 PDZD3Q86UT5 571 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 GABPB2Q8TAK5 448 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-206ENST00000412056 JPH3Q8WXH2 748 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-206ENST00000412056 TMEM159Q96B96 161 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 FMO2Q99518 471 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 SLC38A3Q99624 504 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 AARSD1Q9BTE6 412 aaKnown RBP13.63□□□□□ -0.23
CPNE1-206ENST00000412056 TBC1D10AQ9BXI6 508 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 SLC40A1Q9NP59 571 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 KCNK4Q9NYG8 393 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 GALPQ9UBC7 116 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 KLK13Q9UKR3 277 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 ATXN7L1Q9ULK2 861 aaPredicted RBP13.63□□□□□ -0.23
CPNE1-206ENST00000412056 WASF3Q9UPY6 502 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 CDYLQ9Y232 598 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 MED16Q9Y2X0 877 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 PSAT1Q9Y617 370 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 DCHS1Q96JQ0 3298 aa13.63□□□□□ -0.23
CPNE1-206ENST00000412056 IGHV1OR21-1A0A087WYE8 117 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 TCRBV9S1A1TA0A576 114 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 D6RAR5 112 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 GPC4O75487 556 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 SNRNP200O75643 2136 aaKnown RBP13.62□□□□□ -0.23
CPNE1-206ENST00000412056 MT-CO3P00414 261 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 AHSGP02765 367 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 CSF2RBP32927 897 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 MAPK9P45984 424 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 CUL1Q13616 776 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 SPIDRQ14159 915 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 GPR18Q14330 331 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 RBM20Q5T481 1227 aaKnown RBP13.62□□□□□ -0.23
CPNE1-206ENST00000412056 UBAP2Q5T6F2 1119 aaKnown RBP13.62□□□□□ -0.23
CPNE1-206ENST00000412056 NKAIN2Q5VXU1 208 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 KIAA0408Q6ZU52 694 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 TMPRSS7Q7RTY8 843 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 IFT20Q8IY31 132 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 PHC3Q8NDX5 983 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 SH3KBP1Q96B97 665 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 GFM1Q96RP9 751 aaKnown RBP13.62□□□□□ -0.23
CPNE1-206ENST00000412056 NDNQ99608 321 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 SLC30A3Q99726 388 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 SCNM1Q9BWG6 230 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-206ENST00000412056 CCDC68Q9H2F9 335 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 LRRC4CQ9HCJ2 640 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 ZFATQ9P243 1243 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 NFU1Q9UMS0 254 aa13.62□□□□□ -0.23
CPNE1-206ENST00000412056 CXorf49A8MYA2 514 aaPredicted RBP13.61□□□□□ -0.23
CPNE1-206ENST00000412056 E5RI56 91 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 IFRD1O00458 451 aaPredicted RBP13.61□□□□□ -0.23
CPNE1-206ENST00000412056 C1QAP02745 245 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 GSTA2P09210 222 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 CHRM3P20309 590 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 ACADLP28330 430 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 CD1CP29017 333 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 CD151P48509 253 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 PDX1P52945 283 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 EPHA4P54764 986 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 PLOD1Q02809 727 aaPredicted RBP13.61□□□□□ -0.23
CPNE1-206ENST00000412056 CFHR1Q03591 330 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 MAP9Q49MG5 647 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 C3orf62Q6ZUJ4 267 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 USP53Q70EK8 1073 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 OTOAQ7RTW8 1153 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 TMPRSS9Q7Z410 1059 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 GALNT7Q86SF2 657 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 TMPRSS12Q86WS5 348 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 SLC22A15Q8IZD6 547 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 GALNT15Q8N3T1 639 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 GIMAP7Q8NHV1 300 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 WDR48Q8TAF3 677 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 GPR21Q99679 349 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 NUDT22Q9BRQ3 303 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 UCK1Q9HA47 277 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 RDH14Q9HBH5 336 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 NINJ2Q9NZG7 142 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 TSR3Q9UJK0 312 aaKnown RBP13.61□□□□□ -0.23
CPNE1-206ENST00000412056 CLCA2Q9UQC9 943 aa13.61□□□□□ -0.23
CPNE1-206ENST00000412056 ADAMTS20P59510 1910 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 CACNA1AO00555 2505 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 FAM159BA6NKW6 160 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 KPNA5O15131 536 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 CSO75390 466 aaKnown RBP13.6□□□□□ -0.23
CPNE1-206ENST00000412056 TCEA3O75764 348 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 SLCO2B1O94956 709 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 JUPP14923 745 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 PPM1FP49593 454 aaPredicted RBP13.6□□□□□ -0.23
CPNE1-206ENST00000412056 CLCN7P51798 805 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 GPLD1P80108 840 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 GBX1Q14549 363 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 EFTUD2Q15029 972 aaKnown RBP eCLIP13.6□□□□□ -0.234e-8■■■■■ 37.6
CPNE1-206ENST00000412056 KYNUQ16719 465 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 ACSBG2Q5FVE4 666 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 PLEKHS1Q5SXH7 462 aa13.6□□□□□ -0.23
CPNE1-206ENST00000412056 RBM44Q6ZP01 1051 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms