RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 BOP1Q14137 746 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 PLA2G4EQ3MJ16 856 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 TAF1BQ53T94 588 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 KCTD16Q68DU8 428 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 LRRC8EQ6NSJ5 796 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 TIFABQ6ZNK6 161 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 RAPH1Q70E73 1250 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 SLCO6A1Q86UG4 719 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 ZBTB2Q8N680 514 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 ARID1BQ8NFD5 2236 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 INPP5DQ92835 1189 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 OLFM1Q99784 485 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 GSDMCQ9BYG8 508 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 TMEM168Q9H0V1 697 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 STMN4Q9H169 189 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 SYTL2Q9HCH5 934 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 KLC4Q9NSK0 619 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 UCKL1Q9NWZ5 548 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 EURLQ9NYK6 297 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 SPASTQ9UBP0 616 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CTNNAL1Q9UBT7 734 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 PNMA8BQ9ULN7 279 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 MED16Q9Y2X0 877 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 PCYT1BQ9Y5K3 369 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CSNK1G3Q9Y6M4 447 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 MAP1BP46821 2468 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 HMX2A2RU54 273 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 EIF3FO00303 357 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 MAP2K7O14733 419 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 SCAMP1O15126 338 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 RGS16O15492 202 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 MT-ND3P03897 115 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 FTH1P19P0C7X4 201 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CBSLP0DN79 551 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CBSP35520 551 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 RGS4P49798 205 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CTBSQ01459 385 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 ZKSCAN8Q15776 578 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 ST3GAL2Q16842 350 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 PRRT3Q5FWE3 981 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CFAP206Q8IYR0 622 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 SIDT2Q8NBJ9 832 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 LKAAEAR1Q8TD35 194 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CD200R1Q8TD46 325 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 GPBAR1Q8TDU6 330 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 ISL2Q96A47 359 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 FAM136AQ96C01 138 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CABS1Q96KC9 395 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CNDP2Q96KP4 475 aaKnown RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 DPEP2Q9H4A9 486 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 OSGEPL1Q9H4B0 414 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CAAP1Q9H8G2 361 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 COG4Q9H9E3 785 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CAB39LQ9H9S4 337 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 GPAMQ9HCL2 828 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 SNX15Q9NRS6 342 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 TLK1Q9UKI8 766 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 ACSL5Q9ULC5 683 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 DNAJC16Q9Y2G8 782 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 ZFHX4Q86UP3 3567 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 TRIM38O00635 465 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 ATP8B1O43520 1251 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 GPC4O75487 556 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 ALDOAP04075 364 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 MPOP05164 745 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 GIMD1P0DJR0 217 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 ENO3P13929 434 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 IDSP22304 550 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 SLC26A3P40879 764 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 SHC2P98077 582 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 TIAL1Q01085 375 aaKnown RBP eCLIP16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 HSPA14Q0VDF9 509 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 FOXC1Q12948 553 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 NFE2L1Q14494 772 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 ZNF658BQ4V348 819 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 METRNLQ641Q3 311 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 GKN2Q86XP6 184 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 CEP97Q8IW35 865 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 NKAPQ8N5F7 415 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 GOLGA6L1Q8N7Z2 621 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 ACVR1CQ8NER5 493 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 OR4C6Q8NH72 309 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 ACMSDQ8TDX5 336 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 ADAMTS14Q8WXS8 1223 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 GLMNQ92990 594 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 PGM2Q96G03 612 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 LRRC61Q9BV99 259 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 TCEAL2Q9H3H9 227 aaPredicted RBP16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 CENPHQ9H3R5 247 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 TOR4AQ9NXH8 423 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 FAM8A1Q9UBU6 413 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 SLC23A2Q9UGH3 650 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 RALYQ9UKM9 306 aaKnown RBP16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 KCNK6Q9Y257 313 aa16.18■□□□□ 0.18
TSPAN4-208ENST00000409531 A0A087X1B8 175 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 SLC5A10A0PJK1 596 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 TPP1O14773 563 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 AQP9O43315 295 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 SIGLEC6O43699 453 aa16.17■□□□□ 0.18
TSPAN4-208ENST00000409531 OPA1O60313 960 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms