RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 NUDT22Q9BRQ3 303 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 TBC1D10AQ9BXI6 508 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 FOXP3Q9BZS1 431 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 FBXO5Q9UKT4 447 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 CRYL1Q9Y2S2 319 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 ENTPD2Q9Y5L3 495 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 COLEC10Q9Y6Z7 277 aa19.39■□□□□ 0.69
PDLIM2-207ENST00000409417 TRABD2BA6NFA1 517 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 EIF3HO15372 352 aaKnown RBP eCLIP19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 AOAHP28039 575 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 NDUFS1P28331 727 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 FMO4P31512 558 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 CCKBRP32239 447 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 SLC1A2P43004 574 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 INHBCP55103 352 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 CFHR1Q03591 330 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 FRG1Q14331 258 aaKnown RBP19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 FASTKD3Q14CZ7 662 aaKnown RBP19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 BRD3Q15059 726 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 ZNF789Q5FWF6 425 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 CTSL3PQ5NE16 218 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 WDR74Q6RFH5 385 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 ANKMY2Q8IV38 441 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 SLITRK4Q8IW52 837 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 ZBED8Q8IZ13 594 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 KRT222Q8N1A0 295 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 CEP112Q8N8E3 955 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 FBXO36Q8NEA4 188 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 OR4D9Q8NGE8 314 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 LKAAEAR1Q8TD35 194 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 CERS2Q96G23 380 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 ATXN7L3BQ96GX2 97 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 TMEM121BQ9BXQ6 578 aaPredicted RBP19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 NRSN2Q9GZP1 204 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 ASPMQ8IZT6 3477 aa19.38■□□□□ 0.69
PDLIM2-207ENST00000409417 FREM2Q5SZK8 3169 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 BHMG1C9JSJ3 638 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 KPNA5O15131 536 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 UBXN7O94888 489 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 APOA4P06727 396 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 CSF2RBP32927 897 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 HSPA14Q0VDF9 509 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 GLE1Q53GS7 698 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 NAPRTQ6XQN6 538 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 ZNF574Q6ZN55 896 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 CNTN4Q8IWV2 1026 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 C2CD4AQ8NCU7 369 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 FBXO25Q8TCJ0 367 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 TFGQ92734 400 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 PHACTR1Q9C0D0 580 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 KIR3DX1Q9H7L2 352 aa19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 IARS2Q9NSE4 1012 aaKnown RBP19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 COL27A1Q8IZC6 1860 aaPredicted RBP19.37■□□□□ 0.69
PDLIM2-207ENST00000409417 ESYT3A0FGR9 886 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 GPC4O75487 556 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 SLCO2B1O94956 709 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 PKMP14618 531 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 HOXB3P14651 431 aaPredicted RBP19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 ACADLP28330 430 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 PPM1FP49593 454 aaPredicted RBP19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 GUCY2DQ02846 1103 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 KRT33BQ14525 404 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 TMED2Q15363 201 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 DUS1LQ6P1R4 473 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 TMEM71Q6P5X7 295 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 ZDHHC24Q6UX98 284 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 KIAA0408Q6ZU52 694 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 OTOAQ7RTW8 1153 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 SLC22A15Q8IZD6 547 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 NCSTNQ92542 709 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 LIN37Q96GY3 246 aaPredicted RBP19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 STRADBQ9C0K7 418 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 SEMA6CQ9H3T2 930 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 MVB12BQ9H7P6 319 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 PPANQ9NQ55 473 aaKnown RBP19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 FBXO6Q9NRD1 293 aaPredicted RBP19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 PDP2Q9P2J9 529 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 SLC24A2Q9UI40 661 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 CDYLQ9Y232 598 aa19.36■□□□□ 0.69
PDLIM2-207ENST00000409417 IGHV5-10-1A0A0J9YXX1 117 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 PROS1P07225 676 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 AMD1P17707 334 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 MAPK9P45984 424 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 LEPRP48357 1165 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 CSE1LP55060 971 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 MPP1Q00013 466 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 RTP5Q14D33 572 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 TRMT10BQ6PF06 316 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 UNQ6494/PRO21346Q6UXR6 183 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 GSDMBQ8TAX9 411 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 PYROXD1Q8WU10 500 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 SAYSD1Q9NPB0 183 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 OGFRQ9NZT2 677 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 NIPSNAP2O75323 286 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 HAUS5O94927 633 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 F7P08709 466 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 TYRP1P17643 537 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 CHRM3P20309 590 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 LIMK2P53671 638 aa19.35■□□□□ 0.69
PDLIM2-207ENST00000409417 TRA2AQ13595 282 aaKnown RBP eCLIP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms