RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ODF2Q5BJF6 829 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 C11orf63Q6NUN7 778 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 HIBCHQ6NVY1 386 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 USP53Q70EK8 1073 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF438Q7Z4V0 828 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 SLITRK4Q8IW52 837 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 FAM20CQ8IXL6 584 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 KATNAL2Q8IYT4 538 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 SPARTQ8N0X7 666 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 RCBTB1Q8NDN9 531 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 TNIP2Q8NFZ5 429 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 EXD1Q8NHP7 514 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 WDR36Q8NI36 951 aaKnown RBP9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 CDKL2Q92772 493 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 PMEPA1Q969W9 287 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 LIN37Q96GY3 246 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 OXNAD1Q96HP4 312 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 TEKT5Q96M29 485 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 GBP5Q96PP8 586 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 OR2M4Q96R27 311 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 FAM83DQ9H4H8 585 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 FAIMQ9NVQ4 179 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 KCTD5Q9NXV2 234 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 TMEM9Q9P0T7 183 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 CHMP2BQ9UQN3 213 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 KCNK6Q9Y257 313 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 PPP2R2CQ9Y2T4 447 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF711Q9Y462 761 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 PCDHGA8Q9Y5G5 932 aa9.54□□□□□ -0.88
NIF3L1-202ENST00000409020 UNC13CQ8NB66 2214 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 CCDC187A0A096LP49 1063 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 A0A0A6YYK5 440 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 LOC105371267A0A1B0GV96 52 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 PLD2O14939 933 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 KMOO15229 486 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 KLK10O43240 276 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 HNRNPRO43390 633 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 MTX2O75431 263 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 NDUFA10O95299 355 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ACP5P13686 325 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF8P17098 575 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 BPIP17213 487 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 KRT4P19013 534 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 CD1CP29017 333 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 RBMS1P29558 406 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ALDH4A1P30038 563 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ATP5DP30049 168 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 CSF2RBP32927 897 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ERVPABLB-1P60509 514 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ZFP36L1Q07352 338 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 CLN3Q13286 438 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 OLIG2Q13516 323 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 C16orf72Q14CZ0 275 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 PPP1R7Q15435 360 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 TGIF1Q15583 401 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 PLA2G4EQ3MJ16 856 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 KHDC1Q4VXA5 237 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 TFDP3Q5H9I0 405 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 FAM209AQ5JX71 171 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 IGF2-ASQ6U949 168 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 PCSK4Q6UW60 755 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 KDELC1Q6UW63 502 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 RAB11FIP2Q7L804 512 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 CHST15Q7LFX5 561 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 NLRP8Q86W28 1048 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 GALNT13Q8IUC8 556 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF567Q8N184 647 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 FBXO39Q8N4B4 442 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 OR6C4Q8NGE1 309 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 WDR48Q8TAF3 677 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 SLC37A2Q8TED4 501 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 TFB1MQ8WVM0 346 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 KCNE4Q8WWG9 221 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ERP27Q96DN0 273 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 MAELQ96JY0 434 aaKnown RBP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 QKIQ96PU8 341 aaKnown RBP eCLIP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ADGRE3Q9BY15 652 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 CDH19Q9H159 772 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ZFYVE1Q9HBF4 777 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 BPIFA1Q9NP55 256 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 THSD1Q9NS62 852 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 PKD2L2Q9NZM6 624 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 TRIM10Q9UDY6 481 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 TBC1D29Q9UFV1 150 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 PISDQ9UG56 409 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNHIT2Q9UHR6 403 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 TMPRSS11EQ9UL52 423 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 LOXL2Q9Y4K0 774 aa9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 EPN1Q9Y6I3 576 aaPredicted RBP9.53□□□□□ -0.88
NIF3L1-202ENST00000409020 RHPN2P1A8MT19 583 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 GOLGA8TH3BQL2 631 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 BUD23O43709 281 aaKnown RBP9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 CCL4P13236 92 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 PNLIPP16233 465 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 BTF3P20290 206 aaKnown RBP9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 CCKBRP32239 447 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 NR2C2P49116 596 aa9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 ADARP55265 1226 aaKnown RBP9.52□□□□□ -0.89
NIF3L1-202ENST00000409020 COL9A2Q14055 689 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms