RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TCN2P20062 427 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 ADRA1DP25100 572 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 PSMA3P25788 255 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 MSNP26038 577 aaKnown RBP8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 STAT5AP42229 794 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 ARSDP51689 593 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 GDF10P55107 478 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 PRAMEP78395 509 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 MSLNQ13421 630 aaPredicted RBP8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 OLIG2Q13516 323 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 SEMA5AQ13591 1074 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 LY6DQ14210 128 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 PTPRCAPQ14761 206 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 OASLQ15646 514 aaKnown RBP8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 MEI1Q5TIA1 1274 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 ARMC3Q5W041 872 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 CAPRIN2Q6IMN6 1127 aaKnown RBP8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 DRICH1Q6PGQ1 229 aaPredicted RBP8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 PACS1Q6VY07 963 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 LCN9Q8WX39 176 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 EXTL1Q92935 676 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 PMEPA1Q969W9 287 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 CDKN2AIPNLQ96HQ2 116 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 RMDN2Q96LZ7 410 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 INSM2Q96T92 566 aaPredicted RBP8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 SLC12A9Q9BXP2 914 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 SPRY4Q9C004 299 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 SRMSQ9H3Y6 488 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 EIF2B3Q9NR50 452 aaKnown RBP8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 RAB6BQ9NRW1 208 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 SMARCAL1Q9NZC9 954 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 FAM8A1Q9UBU6 413 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 ANAPC5Q9UJX4 755 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 R3HDM2Q9Y2K5 976 aaKnown RBP8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 KCTD3Q9Y597 815 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 RPS6KL1Q9Y6S9 549 aa8.86□□□□□ -0.99
SNORD88A-201ENST00000408314 C21orf140B9A014 251 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 CPNE3O75131 537 aaKnown RBP8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 KIAA0754O94854 1291 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 RECKO95980 971 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 RPN2P04844 631 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 APRTP07741 180 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 TPH1P17752 444 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 CDH3P22223 829 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 SHMT2P34897 504 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 TUBB4BP68371 445 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 SARNPP82979 210 aaKnown RBP8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 CDC20Q12834 499 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 SRSF6Q13247 344 aaKnown RBP8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 TUBB2AQ13885 445 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 TMED2Q15363 201 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 CCNG2Q16589 344 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 TBR1Q16650 682 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 TSTD2Q5T7W7 516 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 GSTA5Q7RTV2 222 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 MPP5Q8N3R9 675 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 OR52K1Q8NGK4 314 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 ATG4AQ8WYN0 398 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 STARD8Q92502 1023 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 FERD3LQ96RJ6 166 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 TUBB2BQ9BVA1 445 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 TFB2MQ9H5Q4 396 aaKnown RBP8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 FAM96AQ9H5X1 160 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 ETNK1Q9HBU6 452 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 APMAPQ9HDC9 416 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 LZTFL1Q9NQ48 299 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 LATS2Q9NRM7 1088 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 C1GALT1Q9NS00 363 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 FGF21Q9NSA1 209 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 GEMIN8Q9NWZ8 242 aaKnown RBP8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 SOHLH2Q9NX45 425 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 POLG2Q9UHN1 485 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 POMT2Q9UKY4 750 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 PADI1Q9ULC6 663 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 DRG1Q9Y295 367 aaKnown RBP8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 BTRCQ9Y297 605 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 MRFAP1Q9Y605 127 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 CFAP20Q9Y6A4 193 aaKnown RBP8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 ZNF462Q96JM2 2506 aa8.85□□□□□ -0.99
SNORD88A-201ENST00000408314 LOC101059948A0A1B0GTJ6 334 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 TCRBV7S2A1N4TA0A589 114 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 CCDC78A2IDD5 438 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 GSAPA4D1B5 854 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 OR6C74A6NCV1 312 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 C2orf74A8MZ97 194 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 J3QKU1 62 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 CCL22O00626 93 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 KPNA5O15131 536 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 SGTAO43765 313 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 KIF1CO43896 1103 aaKnown RBP8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 SPAG6O75602 509 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 HBQ1P09105 142 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 MSL3P1P0C860 447 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 PLA2G2AP14555 144 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 DLSTP36957 453 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 TTPAP49638 278 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 RPS15P62841 145 aaKnown RBP8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 SH3BP2P78314 561 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 CDK16Q00536 496 aa8.84□□□□□ -0.99
SNORD88A-201ENST00000408314 ATMQ13315 3056 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms