RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 FAM219BQ5XKK7 198 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CYHR1Q6ZMK1 362 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 LRRTM4Q86VH4 590 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 AMZ2Q86W34 360 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 DCBLD1Q8N8Z6 715 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SPDYE1Q8NFV5 336 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 PIWIL2Q8TC59 973 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 TRPC4APQ8TEL6 797 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 GRAMD1AQ96CP6 724 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 COX14Q96I36 57 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ZNF514Q96K75 400 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 HIST1H2AHQ96KK5 128 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 NSUN5Q96P11 429 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 HIST1H2AJQ99878 128 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 H2AFJQ9BTM1 129 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 APOOQ9BUR5 198 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ERVK-6Q9BXR3 956 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TEX101Q9BY14 249 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 DRC3Q9H069 523 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ILKAPQ9H0C8 392 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 KDM4CQ9H3R0 1056 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 EBF2Q9HAK2 575 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SEMA4BQ9NPR2 832 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 USP36Q9P275 1121 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 GULP1Q9UBP9 304 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SLC23A2Q9UGH3 650 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 FRYLO94915 3013 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PLXNA2O75051 1894 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PLXNB3Q9ULL4 1909 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ZNF106Q9H2Y7 1883 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 TMEM114B3SHH9 223 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TMEM233B4DJY2 109 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 LILRB5O75023 590 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 NDUFS2O75306 463 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ZNF217O75362 1048 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 GPC4O75487 556 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 APBB3O95704 486 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 HNRNPA2B1P22626 353 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 MAP4P27816 1152 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 GDF5P43026 501 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 GNPDA1P46926 289 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 HSPA7P48741 367 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 THOP1P52888 689 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 DNAJB13P59910 316 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ARHGAP8P85298 464 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 IFT88Q13099 833 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 AGERQ15109 404 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 BCL7AQ4VC05 210 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 UNC50Q53HI1 259 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SH2D4BQ5SQS7 431 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ENPP7Q6UWV6 458 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TRIM69Q86WT6 500 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 WDR75Q8IWA0 830 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 SPEM1Q8N4L4 309 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 BIRC7Q96CA5 298 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CNDP1Q96KN2 507 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 RILPQ96NA2 401 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 FOPNLQ96NB1 174 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TRIM54Q9BYV2 358 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CHRDQ9H2X0 955 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 EPHX3Q9H6B9 360 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 COG4Q9H9E3 785 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 KLC4Q9NSK0 619 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 WSB2Q9NYS7 404 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 WWOXQ9NZC7 414 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 EIF2B4Q9UI10 523 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 ZDHHC2Q9UIJ5 367 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CDYLQ9Y232 598 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PDE10AQ9Y233 779 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ARL2BPQ9Y2Y0 163 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ASB1Q9Y576 335 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CFAP20Q9Y6A4 193 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 CABIN1Q9Y6J0 2220 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SPEGQ15772 3267 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 MGAT4DA6NG13 374 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 GIPC1O14908 333 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 MAP3K13O43283 966 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PI15O43692 258 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CCNT2O60583 730 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 DIAPH2O60879 1101 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 SLCO2B1O94956 709 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 FUCA1P04066 466 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CEACAM5P06731 702 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CYP2A7P20853 494 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 MAOBP27338 520 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 OXTRP30559 389 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 AKT2P31751 481 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 BDKRB1P46663 353 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 CXCL12P48061 93 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 RPL14P50914 215 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 ARFIP2P53365 341 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ALDH18A1P54886 795 aaKnown RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 TSTA3Q13630 321 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 PDCD2Q16342 344 aaPredicted RBP3.63□□□□□ -1.83
RTN4-208ENST00000404909 RBBP7Q16576 425 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 PPP1R3AQ16821 1122 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 VWA5B1Q5TIE3 1220 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 ANKS6Q68DC2 871 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 TSSK4Q6SA08 328 aa3.63□□□□□ -1.83
RTN4-208ENST00000404909 FAM83HQ6ZRV2 1179 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms