RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 TMEM199Q8N511 208 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 DTWD1Q8N5C7 304 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ZNF461Q8TAF7 563 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 SLC22A17Q8WUG5 538 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 SGCDQ92629 289 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 SCAMP4Q969E2 229 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 MED8Q96G25 268 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ZFRQ96KR1 1074 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 ASB2Q96Q27 587 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 OR52E6Q96RD3 313 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 MYOCQ99972 504 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 MRPL9Q9BYD2 267 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 NAA50Q9GZZ1 169 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 ZDHHC4Q9NPG8 344 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 IL26Q9NPH9 171 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 PNPLA3Q9NST1 481 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 CCM2LQ9NUG4 571 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 HCFC1R1Q9NWW0 138 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 DUS2Q9NX74 493 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 VAPAQ9P0L0 249 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 FNIP2Q9P278 1114 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 WARS2Q9UGM6 360 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 SLCO3A1Q9UIG8 710 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 MBD1Q9UIS9 605 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 LSM7Q9UK45 103 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 FAF1Q9UNN5 650 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 FAM92AA1XBS5 289 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 NEDD8-MDP1E9PL57 170 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 NRG2O14511 850 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 HS6ST1O60243 411 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 WDR47O94967 919 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 IGHA2P01877 340 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ESR1P03372 595 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ABCB1P08183 1280 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 FGF4P08620 206 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ZDHHC11BP0C7U3 371 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 CHRM1P11229 460 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 AQP1P29972 269 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 SLC26A3P40879 764 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 MTHFRP42898 656 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 RPS9P46781 194 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 STT3AP46977 705 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 CLCN7P51798 805 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 CHRNB3Q05901 458 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 VAC14Q08AM6 782 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ABRQ12979 859 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 DYNC1I2Q13409 638 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 LSAMPQ13449 338 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 NFATC2Q13469 925 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 SPIDRQ14159 915 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 TRIM60Q495X7 471 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 DGKKQ5KSL6 1271 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 LDLRAP1Q5SW96 308 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 LRRC66Q68CR7 880 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 RETSATQ6NUM9 610 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 PRMT9Q6P2P2 845 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 SBSNQ6UWP8 590 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 TMEM26Q6ZUK4 368 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 SPATA19Q7Z5L4 167 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ADAMTSL2Q86TH1 951 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 C2orf73Q8N5S3 287 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 ZBTB2Q8N680 514 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 HJURPQ8NCD3 748 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 GPR26Q8NDV2 337 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 RIN3Q8TB24 985 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 CYB5D2Q8WUJ1 264 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 SELENOMQ8WWX9 145 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 MRPS31Q92665 395 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 KCNJ9Q92806 393 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 TMBIM1Q969X1 311 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 TADA1Q96BN2 335 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 PLD4Q96BZ4 506 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 SDCCAG3Q96C92 435 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 CENPNQ96H22 339 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 EGLN2Q96KS0 407 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 APOLD1Q96LR9 279 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ZNF597Q96LX8 424 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 C9orf16Q9BUW7 83 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 C2orf49Q9BVC5 232 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 KLF16Q9BXK1 252 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 DGCR6LQ9BY27 220 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 IKZF5Q9H5V7 419 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 CLK4Q9HAZ1 481 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 PARVBQ9HBI1 364 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 MRPL17Q9NRX2 175 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 OLAHQ9NV23 265 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 IL37Q9NZH6 218 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ACTR3BQ9P1U1 418 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 MTRRQ9UBK8 725 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ADGRE2Q9UHX3 823 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 GNPTGQ9UJJ9 305 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 EIF3LQ9Y262 564 aaKnown RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 INVSQ9Y283 1065 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 VPS9D1Q9Y2B5 631 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ARIH1Q9Y4X5 557 aaPredicted RBP4.28□□□□□ -1.72
SMC6-203ENST00000402989 PCDHA9Q9Y5H5 950 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 ATG2BQ96BY7 2078 aa4.28□□□□□ -1.72
SMC6-203ENST00000402989 FAM234BA2RU67 622 aa4.28□□□□□ -1.73
SMC6-203ENST00000402989 H3BNH8 94 aa4.28□□□□□ -1.73
SMC6-203ENST00000402989 MAGEB3O15480 346 aa4.28□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms