RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PJA1Q8NG27 643 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 SGF29Q96ES7 293 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 LENG8Q96PV6 779 aaPredicted RBP19■□□□□ 0.63
PDLIM2-204ENST00000397760 HHIPQ96QV1 700 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 MBNL1Q9NR56 388 aaKnown RBP19■□□□□ 0.63
PDLIM2-204ENST00000397760 MBD1Q9UIS9 605 aaPredicted RBP19■□□□□ 0.63
PDLIM2-204ENST00000397760 SLCO1B7G3V0H7 640 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 AP2A2O94973 939 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 HSPA4LO95757 839 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 MAT2AP31153 395 aaKnown RBP19■□□□□ 0.63
PDLIM2-204ENST00000397760 TMEM115Q12893 351 aaPredicted RBP19■□□□□ 0.63
PDLIM2-204ENST00000397760 LRRC8EQ6NSJ5 796 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 NKAPQ8N5F7 415 aaKnown RBP19■□□□□ 0.63
PDLIM2-204ENST00000397760 CLDN23Q96B33 292 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 CCDC28BQ9BUN5 200 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 VCX3BQ9H321 246 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 SGK2Q9HBY8 427 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 OXSMQ9NWU1 459 aa19■□□□□ 0.63
PDLIM2-204ENST00000397760 MAGEA13PA6NCF6 341 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 LRRC72A6NJI9 287 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 ARRB2P32121 409 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 PPP2CBP62714 309 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 PPP2CAP67775 309 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 ACAP2Q15057 778 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 IRF4Q15306 451 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 CFAP157Q5JU67 520 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 ADAMTSL4Q6UY14 1074 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 TRIM74Q86UV6 250 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 TP53I13Q8NBR0 393 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 OR2T34Q8NGX1 318 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 HIC2Q96JB3 615 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 CNDP1Q96KN2 507 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 RTKNQ9BST9 563 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 C1QTNF7Q9BXJ2 289 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 ILKAPQ9H0C8 392 aaPredicted RBP18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 CHRDQ9H2X0 955 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 SPATS2LQ9NUQ6 558 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 CPSF2Q9P2I0 782 aaKnown RBP18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 SCOCQ9UIL1 159 aa18.99■□□□□ 0.63
PDLIM2-204ENST00000397760 CD1DP15813 335 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 PAX7P23759 505 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 IL2P60568 153 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 ZXDAP98168 799 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 ZYG11AQ6WRX3 759 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 CPNE9Q8IYJ1 553 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 TMEM151AQ8N4L1 468 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 SPEM1Q8N4L4 309 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 RASGEF1AQ8N9B8 481 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 EEF1AKMT1Q8WVE0 214 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 MRPL57Q9BQC6 102 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 MRPL46Q9H2W6 279 aaKnown RBP18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 COG4Q9H9E3 785 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 S100A14Q9HCY8 104 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 LATS2Q9NRM7 1088 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 RAP2CQ9Y3L5 183 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 SIT1Q9Y3P8 196 aa18.98■□□□□ 0.63
PDLIM2-204ENST00000397760 OR2AG2A6NM03 316 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 SGTAO43765 313 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 CDK14O94921 469 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 IGLV3-19P01714 112 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 TFEBP19484 476 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 ASPHQ12797 758 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 INPP5AQ14642 412 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 ATG14Q6ZNE5 492 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 HEATR4Q86WZ0 1026 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 GATA6Q92908 595 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 CLPTM1LQ96KA5 538 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 ZCCHC2Q9C0B9 1178 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 DERL2Q9GZP9 239 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 DRC3Q9H069 523 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 TRIM39Q9HCM9 518 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 XPR1Q9UBH6 696 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 VTI1BQ9UEU0 232 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 CYP8B1Q9UNU6 501 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 LRRK1Q38SD2 2015 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 DPPA5A6NC42 116 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 TK2O00142 265 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 QSOX1O00391 747 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 SLC31A1O15431 190 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 ZBTB14O43829 449 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 RBP1P09455 135 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 SBK3P0C264 359 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 LINGO3P0C6S8 592 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 RPS9P46781 194 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 SLC25A3Q00325 362 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 LIPMQ5VYY2 423 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 TMEM154Q6P9G4 183 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 NAPRTQ6XQN6 538 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 ISCA2Q86U28 154 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 TRIM69Q86WT6 500 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 ZBTB2Q8N680 514 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 ASB12Q8WXK4 309 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 LINGO1Q96FE5 620 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 COX14Q96I36 57 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 OR2AG1Q9H205 316 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 ALG9Q9H6U8 611 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 PLXNB3Q9ULL4 1909 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 TRIOO75962 3097 aa18.97■□□□□ 0.63
PDLIM2-204ENST00000397760 TARM1B6A8C7 271 aa18.96■□□□□ 0.63
PDLIM2-204ENST00000397760 RAD51BO15315 384 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms