RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 HMBOX1Q6NT76 420 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 ERMP1Q7Z2K6 904 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 ITIH5Q86UX2 942 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 GPR150Q8NGU9 434 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 SNRNP27Q8WVK2 155 aaKnown RBP10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 LRTM1Q9HBL6 345 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZDHHC7Q9NXF8 308 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZNF225Q9UK10 706 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 OAS3Q9Y6K5 1087 aaKnown RBP10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 SCN10AQ9Y5Y9 1956 aa10.26□□□□□ -0.77
CPSF1P1-201ENST00000397477 PRR23AA6NEV1 266 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 RFPL2O75678 378 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SNAP29O95721 258 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 CSF2RAP15509 400 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZNF26P17031 533 aaPredicted RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 IL12AP29459 219 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 NR1H2P55055 460 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SNRPD1P62314 119 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 TRAP1Q12931 704 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 BNIP2Q12982 314 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 DYNC1I2Q13409 638 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 STARD3Q14849 445 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 TYSND1Q2T9J0 566 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 PABPC1LQ4VXU2 614 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 FAM98BQ52LJ0 330 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 B3GNT6Q6ZMB0 384 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 GALNT5Q7Z7M9 940 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 APLFQ8IW19 511 aaPredicted RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 HS3ST5Q8IZT8 346 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 MARVELD2Q8N4S9 558 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 BDH2Q9BUT1 245 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 KLF16Q9BXK1 252 aaPredicted RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 AIG1Q9NVV5 245 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SMOXQ9NWM0 555 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 NUDT4Q9NZJ9 180 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 DHRS7Q9Y394 339 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 GPR45Q9Y5Y3 372 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SMIM31A0A1B0GVY4 71 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 NPIPB15A6NHN6 443 aaPredicted RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 H3BNC9 293 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 DIRAS1O95057 198 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZBTB11O95625 1053 aaPredicted RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 CST1P01037 141 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 KRT6AP02538 564 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SOD2P04179 222 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 KRT6BP04259 564 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 RPS17P08708 135 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 S100A3P33764 101 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 GNPDA1P46926 289 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 KRT6CP48668 564 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 ATP13A5Q4VNC0 1218 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLC8B1Q6J4K2 584 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 ANKRD26P1Q6NSI1 321 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 USP45Q70EL2 814 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SZRD1Q7Z422 152 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SNX20Q7Z614 316 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 FOXJ1Q92949 421 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 EID2BQ96D98 161 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 THAP11Q96EK4 314 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 CENPNQ96H22 339 aaPredicted RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZFRQ96KR1 1074 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 DGCR6LQ9BY27 220 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 PNPLA3Q9NST1 481 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 RHBDL2Q9NX52 303 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 LHX3Q9UBR4 397 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLC25A13Q9UJS0 675 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLC22A14Q9Y267 594 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 E2F3O00716 465 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 B4GAT1O43505 415 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 H6PDO95479 791 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 B3GALT4O96024 378 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 FGF4P08620 206 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 HMGCLP35914 325 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 MTHFRP42898 656 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 RANBP1P43487 201 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SETMARQ53H47 684 aaPredicted RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 CCDC81Q6ZN84 652 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 DPY19L3Q6ZPD9 716 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 Q6ZSR9 355 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 KIAA2013Q8IYS2 634 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 TTC30BQ8N4P2 665 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 METTL25Q8N6Q8 603 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 CHST14Q8NCH0 376 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 SLAIN1Q8ND83 568 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 GPR26Q8NDV2 337 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 C2orf15Q8WU43 125 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 CGREF1Q99674 301 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 WRAP53Q9BUR4 548 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 RPF2Q9H7B2 306 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 CLK4Q9HAZ1 481 aaKnown RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 COMMD8Q9NX08 183 aa10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 KIAA1522Q9P206 1035 aaPredicted RBP10.25□□□□□ -0.77
CPSF1P1-201ENST00000397477 TRAV19A0A0A6YYK7 116 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 OR56A5P0C7T3 313 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 NFKB2Q00653 900 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 IRF8Q02556 426 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 MERTKQ12866 999 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 SERPINA13PQ6UXR4 307 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 ZDHHC13Q8IUH4 622 aa10.24□□□□□ -0.77
CPSF1P1-201ENST00000397477 RGL4Q8IZJ4 473 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms