RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 MAPK15Q8TD08 544 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 PDCD6IPQ8WUM4 868 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 PIH1D2Q8WWB5 315 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 SLC39A7Q92504 469 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 ECHDC3Q96DC8 303 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 KLHL32Q96NJ5 620 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 C20orf27Q9GZN8 174 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 ABCG4Q9H172 646 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 SUV39H2Q9H5I1 410 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 NLE1Q9NVX2 485 aaPredicted RBP17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 MID2Q9UJV3 735 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 TLK1Q9UKI8 766 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 PPIL1Q9Y3C6 166 aa17.2■□□□□ 0.34
TNFSF13-205ENST00000396545 G3V2L1 256 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 DNAJC6O75061 913 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 C1QL1O75973 258 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 PRB1P04280 392 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 LPOP22079 712 aaPredicted RBP17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 CRABP2P29373 138 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 ARSDP51689 593 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 ARFIP2P53365 341 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 PCBP4P57723 403 aaKnown RBP17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 RAB10P61026 200 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 POLR2LP62875 67 aaKnown RBP17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 POU4F1Q01851 419 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 CDKN3Q16667 212 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 DEFB133Q30KQ1 61 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 GUSBP11Q6P575 273 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 GPR155Q7Z3F1 870 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 CAMK1DQ8IU85 385 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 CRLF3Q8IUI8 442 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 CILP2Q8IUL8 1156 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 C10orf107Q8IVU9 208 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 LSM14AQ8ND56 463 aaKnown RBP17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 ZNF248Q8NDW4 579 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 LMX1AQ8TE12 382 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 ERP27Q96DN0 273 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 LYSMD1Q96S90 227 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 TMEM120AQ9BXJ8 343 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 POLR1BQ9H9Y6 1135 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 NMRAL1Q9HBL8 299 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 KCNK4Q9NYG8 393 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 DCTN4Q9UJW0 460 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 PNMA8BQ9ULN7 279 aaPredicted RBP17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 FLNBO75369 2602 aaKnown RBP17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 A0A0J9YYE9 177 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 TEX51A0A1B0GUA7 166 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 HAUS5O94927 633 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 TRBC1P01850 177 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 STMN1P16949 149 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 IGFALSP35858 605 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 ERVPABLB-1P60509 514 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 ISXQ2M1V0 245 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 LRRC73Q5JTD7 316 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 BRAT1Q6PJG6 821 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 GDPD4Q6W3E5 623 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 ZCCHC23Q6ZST2 131 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 RAPH1Q70E73 1250 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 CEP97Q8IW35 865 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 RBFAQ8N0V3 343 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 TMEM151AQ8N4L1 468 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 PAF1Q8N7H5 531 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 GPR150Q8NGU9 434 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 BTN2A2Q8WVV5 523 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 HDAC10Q969S8 669 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 BOCQ9BWV1 1114 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 RASSF4Q9H2L5 321 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 TCEAL2Q9H3H9 227 aaPredicted RBP17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 ZNF395Q9H8N7 513 aaPredicted RBP17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 ASCL3Q9NQ33 180 aa17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 APOBEC3BQ9UH17 382 aaKnown RBP17.19■□□□□ 0.34
TNFSF13-205ENST00000396545 RP1P56715 2156 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 A0A087X1B8 175 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 A0A0G2JND7 137 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 EME2A4GXA9 379 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 CFAP73A6NFT4 308 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 PHGDHO43175 533 aaKnown RBP17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 HMGCLP35914 325 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 ZNF140P52738 457 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 PTK2BQ14289 1009 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 MRNIPQ6NTE8 343 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 CNSTQ6PJW8 725 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 EFL1Q7Z2Z2 1120 aaKnown RBP17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 CCDC91Q7Z6B0 441 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 TTC7BQ86TV6 843 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 CENPLQ8N0S6 344 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 PPP1R14CQ8TAE6 165 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 ELMO2Q96JJ3 720 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 TBATAQ96M53 351 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 SIKE1Q9BRV8 207 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 LRRC61Q9BV99 259 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 FBXO6Q9NRD1 293 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 SPASTQ9UBP0 616 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 DKK3Q9UBP4 350 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 ACOT9Q9Y305 439 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 KCTD3Q9Y597 815 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 ARL5AQ9Y689 179 aa17.18■□□□□ 0.34
TNFSF13-205ENST00000396545 A0A1W2PNU3 283 aaPredicted RBP17.17■□□□□ 0.34
TNFSF13-205ENST00000396545 CPED1A4D0V7 1026 aa17.17■□□□□ 0.34
TNFSF13-205ENST00000396545 TARM1B6A8C7 271 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms