RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 GPC4O75487 556 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 KRT37O76014 449 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 SLCO2B1O94956 709 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 VIPP01282 170 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 ITGA2BP08514 1039 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 F7P08709 466 aaPredicted RBP20.85■□□□□ 0.93
FXN-202ENST00000396364 XRCC1P18887 633 aaPredicted RBP20.85■□□□□ 0.93
FXN-202ENST00000396364 SAT1P21673 171 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 FDXRP22570 491 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 ABCG1P45844 678 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 PREPP48147 710 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 CLCN7P51798 805 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 IFFO1Q0D2I5 559 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 USP10Q14694 798 aaKnown RBP20.85■□□□□ 0.93
FXN-202ENST00000396364 ZNF658BQ4V348 819 aaPredicted RBP20.85■□□□□ 0.93
FXN-202ENST00000396364 RBM20Q5T481 1227 aaKnown RBP20.85■□□□□ 0.93
FXN-202ENST00000396364 PDZD3Q86UT5 571 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 ALYREFQ86V81 257 aaKnown RBP20.85■□□□□ 0.93
FXN-202ENST00000396364 SLC22A15Q8IZD6 547 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 NAGSQ8N159 534 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 SFRP1Q8N474 314 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 GPR156Q8NFN8 814 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 LKAAEAR1Q8TD35 194 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 FAM136AQ96C01 138 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 C12orf66Q96MD2 445 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.85■□□□□ 0.93
FXN-202ENST00000396364 CAAP1Q9H8G2 361 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 POT1Q9NUX5 634 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 SLC39A10Q9ULF5 831 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 PADI4Q9UM07 663 aa20.85■□□□□ 0.93
FXN-202ENST00000396364 ARHGEF17Q96PE2 2063 aaPredicted RBP20.84■□□□□ 0.93
FXN-202ENST00000396364 RHPN2P1A8MT19 583 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 NUDT21O43809 227 aaKnown RBP20.84■□□□□ 0.93
FXN-202ENST00000396364 CKMT1AP12532 417 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 GLB1P16278 677 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 STMN1P16949 149 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 CKMT2P17540 419 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 CSRP1P21291 193 aaKnown RBP20.84■□□□□ 0.93
FXN-202ENST00000396364 FASLGP48023 281 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 PROX2Q3B8N5 592 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 TTC23LQ6PF05 361 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 NEK10Q6ZWH5 1172 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 CCDC91Q7Z6B0 441 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 SLC35F3Q8IY50 421 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 KYQ8NBH2 561 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 SIDT2Q8NBJ9 832 aaKnown RBP20.84■□□□□ 0.93
FXN-202ENST00000396364 SLC37A2Q8TED4 501 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 MCMBPQ9BTE3 642 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 OR52A5Q9H2C5 316 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 IMP3Q9NV31 184 aaKnown RBP20.84■□□□□ 0.93
FXN-202ENST00000396364 BTBD3Q9Y2F9 522 aa20.84■□□□□ 0.93
FXN-202ENST00000396364 ZNF292O60281 2723 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 IQANK1A0A1B0GTG1 560 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 TNFSF14O43557 240 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 NOBOXO60393 691 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 MTHFD1P11586 935 aaKnown RBP20.83■□□□□ 0.93
FXN-202ENST00000396364 CDKN2DP55273 166 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 IL2P60568 153 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 HHEXQ03014 270 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 CAPRIN2Q6IMN6 1127 aaKnown RBP20.83■□□□□ 0.93
FXN-202ENST00000396364 UNC5DQ6UXZ4 953 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 PIP4P1Q86T03 277 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 ARL14Q8N4G2 192 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 NKAPQ8N5F7 415 aaKnown RBP20.83■□□□□ 0.93
FXN-202ENST00000396364 CD200R1Q8TD46 325 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 MAGEC3Q8TD91 643 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 ZFPM2Q8WW38 1151 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 TFGQ92734 400 aaPredicted RBP20.83■□□□□ 0.93
FXN-202ENST00000396364 MTBPQ96DY7 904 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 RTKNQ9BST9 563 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 EPB41L4BQ9H329 900 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 MVB12BQ9H7P6 319 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 PSMC3IPQ9P2W1 217 aaPredicted RBP20.83■□□□□ 0.93
FXN-202ENST00000396364 CPNE7Q9UBL6 633 aa20.83■□□□□ 0.93
FXN-202ENST00000396364 MTO1Q9Y2Z2 717 aaKnown RBP20.83■□□□□ 0.93
FXN-202ENST00000396364 ASCC3Q8N3C0 2202 aaKnown RBP20.83■□□□□ 0.93
FXN-202ENST00000396364 NUDT17P0C025 328 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 MPC1LP0DKB6 136 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 PNLIPP16233 465 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 CRABP2P29373 138 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 PDHA2P29803 388 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 CLCA4Q14CN2 919 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 RPE65Q16518 533 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 UBAP2Q5T6F2 1119 aaKnown RBP20.82■□□□□ 0.92
FXN-202ENST00000396364 NAPRTQ6XQN6 538 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 RAPH1Q70E73 1250 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 C17orf82Q86X59 251 aaPredicted RBP20.82■□□□□ 0.92
FXN-202ENST00000396364 MYO1HQ8N1T3 1032 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 LILRA3Q8N6C8 439 aaPredicted RBP20.82■□□□□ 0.92
FXN-202ENST00000396364 HNRNPLLQ8WVV9 542 aaKnown RBP20.82■□□□□ 0.92
FXN-202ENST00000396364 RMDN2Q96LZ7 410 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 TRIT1Q9H3H1 467 aaKnown RBP20.82■□□□□ 0.92
FXN-202ENST00000396364 GPAMQ9HCL2 828 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 POLG2Q9UHN1 485 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 ASF1AQ9Y294 204 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 WDR37Q9Y2I8 494 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 MED16Q9Y2X0 877 aa20.82■□□□□ 0.92
FXN-202ENST00000396364 GVINP1Q7Z2Y8 2422 aa20.81■□□□□ 0.92
FXN-202ENST00000396364 TRBV23OR9-2A0A075B6M9 112 aa20.81■□□□□ 0.92
FXN-202ENST00000396364 EME2A4GXA9 379 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms