RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 BTN3A1O00481 513 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 AP1G1O43747 822 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 SUPT7LO94864 414 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 CDK14O94921 469 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 CHRM3P20309 590 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 CD6P30203 668 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 OXTRP30559 389 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 HOXA6P31267 233 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 SPINT3P49223 89 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 HERC3Q15034 1050 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 PFKFB4Q16877 469 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 GPRC6AQ5T6X5 926 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 DPPA4Q7L190 304 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 CPNE9Q8IYJ1 553 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 ULK4Q96C45 1275 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 SPACA7Q96KW9 195 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 BOCQ9BWV1 1114 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 SHCBP1LQ9BZQ2 653 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 SGK2Q9HBY8 427 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 TRAF6Q9Y4K3 522 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 DOCK9Q9BZ29 2069 aa14.85□□□□□ -0.03
SCAF11-204ENST00000395454 KMT2EQ8IZD2 1858 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 GON4LQ3T8J9 2241 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 IGHV1OR15-9A0A0B4J2B8 117 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 NPEPPSL1A6NEC2 478 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 TSPAN6O43657 245 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 SEMA4FO95754 770 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 TDGF1P13385 188 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 NSG1P42857 185 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 HK3P52790 923 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 RALGDSQ12967 914 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 LCP2Q13094 533 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 PDCD2Q16342 344 aaPredicted RBP14.84□□□□□ -0.03
SCAF11-204ENST00000395454 MAP7D1Q3KQU3 841 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 ADAMTSL2Q86TH1 951 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 RAVER1Q8IY67 606 aaKnown RBP14.84□□□□□ -0.03
SCAF11-204ENST00000395454 ARHGAP24Q8N264 748 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 FBXO39Q8N4B4 442 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 CEP70Q8NHQ1 597 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 ZNF483Q8TF39 744 aaPredicted RBP14.84□□□□□ -0.03
SCAF11-204ENST00000395454 ZDHHC3Q9NYG2 299 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 WSB2Q9NYS7 404 aaPredicted RBP14.84□□□□□ -0.03
SCAF11-204ENST00000395454 NUDT4Q9NZJ9 180 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 CRLS1Q9UJA2 301 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 FBXO4Q9UKT5 387 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 ABCA7Q8IZY2 2146 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 CCDC163A0A0D9SF12 145 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 GOLGA8QA0A0J9YX86 632 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 RGSL1A5PLK6 1076 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 GOLGA8OA6NCC3 632 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 LRRC72A6NJI9 287 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 GOLGA8NF8WBI6 632 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 H0Y858 1186 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 EIF3FO00303 357 aaPredicted RBP14.84□□□□□ -0.03
SCAF11-204ENST00000395454 MMP20O60882 483 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 SIX3O95343 332 aaPredicted RBP14.84□□□□□ -0.03
SCAF11-204ENST00000395454 GFAPP14136 432 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 UGT1A6P19224 532 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 NCF2P19878 526 aaPredicted RBP14.84□□□□□ -0.03
SCAF11-204ENST00000395454 UGT1A1P22309 533 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 UGT1A4P22310 534 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 UGT1A3P35503 534 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 UGT1A5P35504 534 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 SH3BP2P78314 561 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 ANGPT1Q15389 498 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 PPP1R3AQ16821 1122 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 KANK2Q63ZY3 851 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 PTRHD1Q6GMV3 140 aaKnown RBP14.84□□□□□ -0.03
SCAF11-204ENST00000395454 SBSNQ6UWP8 590 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 LIPIQ6XZB0 460 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 CLYBLQ8N0X4 340 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 CFAP61Q8NHU2 1237 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 GPR174Q9BXC1 333 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 PREBQ9HCU5 417 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 PRSS21Q9Y6M0 314 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 SDK1Q7Z5N4 2213 aa14.84□□□□□ -0.03
SCAF11-204ENST00000395454 ANKRD12Q6UB98 2062 aa14.83□□□□□ -0.03
SCAF11-204ENST00000395454 LRRK1Q38SD2 2015 aa14.83□□□□□ -0.03
SCAF11-204ENST00000395454 ZNF318Q5VUA4 2279 aa14.83□□□□□ -0.03
SCAF11-204ENST00000395454 IQCF5A8MTL0 148 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 SUPT3HB4E1H0 165 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 NDUFS2O75306 463 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 SUPT3HO75486 399 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 TM7SF2O76062 418 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 C6P13671 934 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 MAT2AP31153 395 aaKnown RBP14.83□□□□□ -0.04
SCAF11-204ENST00000395454 CPA2P48052 419 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 TMEM52BQ4KMG9 183 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 ANKS6Q68DC2 871 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 RPS27LQ71UM5 84 aaKnown RBP14.83□□□□□ -0.04
SCAF11-204ENST00000395454 PDPRQ8NCN5 879 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 OR2T34Q8NGX1 318 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 LKAAEAR1Q8TD35 194 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 AGAP11Q8TF27 550 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 MCUR1Q96AQ8 359 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 DENND2DQ9H6A0 471 aaPredicted RBP14.83□□□□□ -0.04
SCAF11-204ENST00000395454 ZBTB26Q9HCK0 441 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 PCTPQ9UKL6 214 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 COQ6Q9Y2Z9 468 aa14.83□□□□□ -0.04
SCAF11-204ENST00000395454 A0A1W2PQU0 124 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms