RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 KCND1Q9NSA2 647 aa18.75■□□□□ 0.59
COL11A2-204ENST00000395194 PCDHA13Q9Y5I0 950 aa18.75■□□□□ 0.59
COL11A2-204ENST00000395194 SHANK1Q9Y566 2161 aa18.75■□□□□ 0.59
COL11A2-204ENST00000395194 ESPL1Q14674 2120 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 GSAPA4D1B5 854 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 SLC9B1P1A6NJY1 282 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 KCNN4O15554 427 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 PTMSP20962 102 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 CTNNA2P26232 953 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 PRKAA1Q13131 559 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 UGT8Q16880 541 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 TMTC4Q5T4D3 741 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 LCN10Q6JVE6 187 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 RANBP10Q6VN20 620 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 APLFQ8IW19 511 aaPredicted RBP18.74■□□□□ 0.59
COL11A2-204ENST00000395194 CCDC110Q8TBZ0 833 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 HM13Q8TCT9 377 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 GPR87Q9BY21 358 aa18.74■□□□□ 0.59
COL11A2-204ENST00000395194 FARSAQ9Y285 508 aaKnown RBP18.74■□□□□ 0.59
COL11A2-204ENST00000395194 C5orf60A6NFR6 353 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 PRSS56P0CW18 603 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 UQCRFS1P47985 274 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 PRLHRP49683 370 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 CCL11P51671 97 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 ZNF140P52738 457 aaPredicted RBP18.73■□□□□ 0.59
COL11A2-204ENST00000395194 EIF3EP60228 445 aaKnown RBP18.73■□□□□ 0.59
COL11A2-204ENST00000395194 ABRQ12979 859 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 PRPSAP1Q14558 356 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 CAPRIN2Q6IMN6 1127 aaKnown RBP18.73■□□□□ 0.59
COL11A2-204ENST00000395194 AADACL2Q6P093 401 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 DARS2Q6PI48 645 aaKnown RBP18.73■□□□□ 0.59
COL11A2-204ENST00000395194 SYVN1Q86TM6 617 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 BPHLQ86WA6 291 aaPredicted RBP18.73■□□□□ 0.59
COL11A2-204ENST00000395194 ATCAYQ86WG3 371 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 CDKL3Q8IVW4 592 aaPredicted RBP18.73■□□□□ 0.59
COL11A2-204ENST00000395194 NXPE1Q8N323 547 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 FERD3LQ96RJ6 166 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 SLC25A23Q9BV35 468 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 KLHL25Q9H0H3 589 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 ACSS2Q9NR19 701 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 POMT2Q9UKY4 750 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 BTRCQ9Y297 605 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 COLEC10Q9Y6Z7 277 aa18.73■□□□□ 0.59
COL11A2-204ENST00000395194 CCDC66A2RUB6 948 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 CLEC18AA5D8T8 446 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 TMEM150CB9EJG8 249 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 PJA2O43164 708 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 CRTAMO95727 393 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 RECKO95980 971 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 ATXN8OSP0DMR3 200 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 RBP3P10745 1247 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 RALBP11234 206 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 ITGALP20701 1170 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 NDUFS1P28331 727 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 PTGIRP43119 386 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 LMAN1P49257 510 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 CDKN1CP49918 316 aaPredicted RBP18.72■□□□□ 0.59
COL11A2-204ENST00000395194 LAMB3Q13751 1172 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 SPA17Q15506 151 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 CLEC18BQ6UXF7 455 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 FAM26EQ8N5C1 309 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 ENDOVQ8N8Q3 282 aaKnown RBP18.72■□□□□ 0.59
COL11A2-204ENST00000395194 CLEC18CQ8NCF0 446 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 LCN9Q8WX39 176 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 CLIP3Q96DZ5 547 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 DNAJC1Q96KC8 554 aaKnown RBP18.72■□□□□ 0.59
COL11A2-204ENST00000395194 LINC00615Q96LM1 132 aaPredicted RBP18.72■□□□□ 0.59
COL11A2-204ENST00000395194 TBL1YQ9BQ87 522 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 FERMT1Q9BQL6 677 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 OSBPL8Q9BZF1 889 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 SRMSQ9H3Y6 488 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 COG4Q9H9E3 785 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 FANCEQ9HB96 536 aa18.72■□□□□ 0.59
COL11A2-204ENST00000395194 AAR2Q9Y312 384 aaKnown RBP18.72■□□□□ 0.59
COL11A2-204ENST00000395194 RCCD1A6NED2 376 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 TTLL8A6PVC2 850 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 ATP1B2P14415 290 aaPredicted RBP18.71■□□□□ 0.59
COL11A2-204ENST00000395194 PVRP15151 417 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 ST6GAL1P15907 406 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 MC4RP32245 332 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 CTNNA1P35221 906 aaKnown RBP18.71■□□□□ 0.59
COL11A2-204ENST00000395194 PGDP52209 483 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 MSLNQ13421 630 aaPredicted RBP18.71■□□□□ 0.59
COL11A2-204ENST00000395194 NADK2Q4G0N4 442 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 PLEKHS1Q5SXH7 462 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 PHC3Q8NDX5 983 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 ACVR1CQ8NER5 493 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 OR1L3Q8NH93 324 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 ZFPM2Q8WW38 1151 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 THAP4Q8WY91 577 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 SEC14L1Q92503 715 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 ULK4Q96C45 1275 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 COPS8Q99627 209 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 HGH1Q9BTY7 390 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 TRIM5Q9C035 493 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 ING2Q9H160 280 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 SNX7Q9UNH6 387 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 HEBP2Q9Y5Z4 205 aa18.71■□□□□ 0.59
COL11A2-204ENST00000395194 BLACEA4D250 179 aa18.7■□□□□ 0.58
COL11A2-204ENST00000395194 KLHL33A6NCF5 533 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms