RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 MED26O95402 600 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 ALOX5P09917 674 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 ZNF182P17025 639 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 ARNTP27540 789 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 MRPS15P82914 257 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 RETREG3Q86VR2 466 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 HJURPQ8NCD3 748 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 KCNJ9Q92806 393 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 FBXL8Q96CD0 374 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 RDH12Q96NR8 316 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 ATP13A3Q9H7F0 1226 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 TMEM161AQ9NX61 479 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 SLC13A4Q9UKG4 626 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 UNCXA6NJT0 531 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 CLDN9O95484 217 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 GNAO1P09471 354 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 IL7RP16871 459 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 KIR3DL1P43629 444 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 VEGFBP49765 207 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 AFF1P51825 1210 aaKnown RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 OR4D2P58180 307 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 HMGCS1Q01581 520 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 PAGE2BQ5JRK9 111 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 RASAL3Q86YV0 1011 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 PARP8Q8N3A8 854 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 RAET1EQ8TD07 263 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 TMEM125Q96AQ2 219 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 AURKBQ96GD4 344 aaPredicted RBP11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 COPS8Q99627 209 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 SEZ6LQ9BYH1 1024 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 TOR3AQ9H497 397 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 CCSER2Q9H7U1 834 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 STARD7Q9NQZ5 370 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 ITGB1BP2Q9UKP3 347 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 DUSP12Q9UNI6 340 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 PCDHB3Q9Y5E6 796 aa11.49□□□□□ -0.57
UBE2D3-209ENST00000394804 WASH4PA8MWX3 477 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 WDR47O94967 919 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 EOMESO95936 686 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 ALDH1A1P00352 501 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 SERPINA1P01009 418 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 IFNA14P01570 189 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 SBK3P0C264 359 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 ELK4P28324 431 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 OXTRP30559 389 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 KCNQ1P51787 676 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 RPS14P62263 151 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 SMAD3P84022 425 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 MYBPC3Q14896 1274 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 OGFOD2Q6N063 350 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 USP45Q70EL2 814 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 NECAB2Q7Z6G3 386 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 ZDHHC21Q8IVQ6 265 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 AMER2Q8N7J2 671 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 APOLD1Q96LR9 279 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 KCTD5Q9NXV2 234 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 RBBP6Q7Z6E9 1792 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 ANKRD66B4E2M5 251 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 NT5C1B-RDH14C9J2C7 533 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 PPP6CO00743 305 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 RGS10O43665 173 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 LDB2O43679 373 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 ABCB1P08183 1280 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 DDX5P17844 614 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 IDH2P48735 452 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 EPHB3P54753 998 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 TMBIM6P55061 237 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 GOLGA7Q7Z5G4 137 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 TRIM74Q86UV6 250 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 TRIM73Q86UV7 250 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 P2RY8Q86VZ1 359 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 MFSD6LQ8IWD5 586 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 DNAJB8Q8NHS0 232 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 OLAHQ9NV23 265 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 GLYATL1P3A0A0U1RQE8 302 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 ZNF99A8MXY4 864 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 K7EPI3 171 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 ERN1O75460 977 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 CLPXO76031 633 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 FADS2O95864 444 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 NTRK1P04629 796 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 PRPS2P11908 318 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 PPP1R8Q12972 351 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 PMS2P3Q13401 168 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 HIST2H2ACQ16777 129 aaPredicted RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 HIST2H2AA3Q6FI13 130 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 R3HCC1LQ7Z5L2 792 aaKnown RBP11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 ANKRD46Q86W74 232 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 PSMA8Q8TAA3 256 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 PSKH2Q96QS6 385 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 CYP2S1Q96SQ9 504 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 TTPALQ9BTX7 342 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 ABCG8Q9H221 673 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 CD300AQ9UGN4 299 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 IKZF3Q9UKT9 509 aa11.48□□□□□ -0.57
UBE2D3-209ENST00000394804 MCM3APO60318 1980 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 ILVBLA1L0T0 632 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 TARM1B6A8C7 271 aa11.47□□□□□ -0.57
UBE2D3-209ENST00000394804 HHLA1C9JL84 531 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms