RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 C8orf59Q8N0T1 100 aaPredicted RBP18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 SLC15A4Q8N697 577 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 LPCAT1Q8NF37 534 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 FBXL8Q96CD0 374 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 MBOAT4Q96T53 435 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 TDRD1Q9BXT4 1180 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 ADNPQ9H2P0 1102 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 CCSER2Q9H7U1 834 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 SMURF2Q9HAU4 748 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 BPIFA1Q9NP55 256 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 SARS2Q9NP81 518 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 TMEM161AQ9NX61 479 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 VAPAQ9P0L0 249 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 UBA2Q9UBT2 640 aaPredicted RBP18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 VPS9D1Q9Y2B5 631 aa18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 FNDC3AQ9Y2H6 1198 aaKnown RBP18.05■□□□□ 0.48
PCDHA1-202ENST00000394633 F5H5T6 163 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 OR7A17O14581 309 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 BCL10O95999 233 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 CR2P20023 1033 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 TTPAP49638 278 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 MLLT10P55197 1068 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 KIAA0040Q15053 153 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 PTPRRQ15256 657 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 RFTN2Q52LD8 501 aaPredicted RBP18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 VARS2Q5ST30 1063 aaKnown RBP18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 SULT1C3Q6IMI6 304 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 C16orf87Q6PH81 154 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 GOLGA7Q7Z5G4 137 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 SPARTQ8N0X7 666 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 PDZD8Q8NEN9 1154 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 OR4F6Q8NGB9 312 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 OR8J3Q8NGG0 315 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 FBXO30Q8TB52 745 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 RAB2BQ8WUD1 216 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 AURKBQ96GD4 344 aaPredicted RBP18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 C17orf80Q9BSJ5 609 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 SPON2Q9BUD6 331 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 GPN2Q9H9Y4 310 aaPredicted RBP18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 HPS4Q9NQG7 708 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 FAM118AQ9NWS6 357 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 NUDT4Q9NZJ9 180 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 PCDHGA8Q9Y5G5 932 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 IQCF5A8MTL0 148 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 G3V2T6 193 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 HTR1AP08908 422 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 CNPP09543 421 aaKnown RBP18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 GSTM2P28161 218 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 DSC1Q08554 894 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 SKIV2LQ15477 1246 aaKnown RBP18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 AP5B1Q2VPB7 878 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 ZRANB3Q5FWF4 1079 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 C1orf53Q5VUE5 145 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 ANKRD34AQ69YU3 496 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 ZDHHC13Q8IUH4 622 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 HS3ST5Q8IZT8 346 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 CRIPAKQ8N1N5 446 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 CENPSQ8N2Z9 138 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 FIG4Q92562 907 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 HDAC2Q92769 488 aaKnown RBP18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 CCDC115Q96NT0 180 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 AMBRA1Q9C0C7 1298 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 MAGEH1Q9H213 219 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 TSR3Q9UJK0 312 aaKnown RBP18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 PSME2Q9UL46 239 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 PRG3Q9Y2Y8 225 aaPredicted RBP18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 COQ6Q9Y2Z9 468 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 SLC30A1Q9Y6M5 507 aa18.04■□□□□ 0.48
PCDHA1-202ENST00000394633 A0A0U1RQS6 177 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 IFRD1O00458 451 aaPredicted RBP18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 CXCL10P02778 98 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 OCM2P0CE71 109 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 OCMP0CE72 109 aaPredicted RBP18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 JAK1P23458 1154 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 OR1G1P47890 313 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 PLA2G16P53816 162 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 ABRAXAS2Q15018 415 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 FAM43BQ6ZT52 329 aaPredicted RBP18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 CHDHQ8NE62 594 aaPredicted RBP18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 KCNJ9Q92806 393 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 NRBF2Q96F24 287 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 RDH12Q96NR8 316 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 OSBPL10Q9BXB5 764 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 GORASP2Q9H8Y8 452 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 SCUBE2Q9NQ36 999 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 GNPTGQ9UJJ9 305 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 UTS2RQ9UKP6 389 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 SLC27A5Q9Y2P5 690 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 E5RI56 91 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 NOBOXO60393 691 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 KATNA1O75449 491 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 KCNH1O95259 989 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 PIGAP37287 484 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 CLCN4P51793 760 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 PCBP2Q15366 365 aaKnown RBP eCLIP18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 IMPG1Q17R60 797 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 CTU2Q2VPK5 515 aaKnown RBP18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 C5orf22Q49AR2 442 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 C6orf141Q5SZD1 244 aa18.03■□□□□ 0.48
PCDHA1-202ENST00000394633 TTC23Q5W5X9 447 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms