RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 KLHL29Q96CT2 875 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 RDH14Q9HBH5 336 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 PARVBQ9HBI1 364 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 ARL15Q9NXU5 204 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 PDE10AQ9Y233 779 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 ASB1Q9Y576 335 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 DOCK9Q9BZ29 2069 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 A0A1W2PQU0 124 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 E2F3O00716 465 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 TAPBPO15533 448 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 PLRG1O43660 514 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 VEGFDO43915 354 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 GPC4O75487 556 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 SLCO2B1O94956 709 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 ANXA5P08758 320 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 T-ENOLP0DO92 83 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 SRFP11831 508 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 ZNF8P17098 575 aaPredicted RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 CYP2A7P20853 494 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 MAP4P27816 1152 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 MAT2AP31153 395 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 RASSF2P50749 326 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 SFSWAPQ12872 951 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 GTF2H2Q13888 395 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 GBX1Q14549 363 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 INPP5AQ14642 412 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 PCBP2Q15366 365 aaKnown RBP eCLIP8.47□□□□□ -1.057e-11■■■■■ 50.5
TDP1-203ENST00000393454 PLA2G4EQ3MJ16 856 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 FBXO43Q4G163 708 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 GTF2H2CQ6P1K8 395 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 ADAMTSL4Q6UY14 1074 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 DDIASQ8IXT1 998 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 KIF2BQ8N4N8 673 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 LILRA3Q8N6C8 439 aaPredicted RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 TEX9Q8N6V9 391 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 FLCNQ8NFG4 579 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 MCOLN3Q8TDD5 553 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 AGAP11Q8TF27 550 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 ASB11Q8WXH4 323 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 ZNF514Q96K75 400 aaPredicted RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 KCNA7Q96RP8 456 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 CCDC28BQ9BUN5 200 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 CCDC106Q9BWC9 280 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 C1QTNF3Q9BXJ4 246 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 SLC12A9Q9BXP2 914 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 EPHX3Q9H6B9 360 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 NOL11Q9H8H0 719 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 ZBTB26Q9HCK0 441 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 MBNL1Q9NR56 388 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 OPTCQ9UBM4 332 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 PTBP2Q9UKA9 531 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 SCML1Q9UN30 329 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 ZFR2Q9UPR6 939 aaKnown RBP8.47□□□□□ -1.05
TDP1-203ENST00000393454 SORCS3Q9UPU3 1222 aa8.47□□□□□ -1.05
TDP1-203ENST00000393454 TCRBV21S2A2A0A5A6 115 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 PRR5-ARHGAP8B1AHC4 643 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 SDHDO14521 159 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 SLC16A5O15375 505 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 DCXO43602 365 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 POP7O75817 140 aaKnown RBP8.46□□□□□ -1.05
TDP1-203ENST00000393454 DNAJC8O75937 253 aaPredicted RBP8.46□□□□□ -1.05
TDP1-203ENST00000393454 FSBPO95073 299 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 FGF4P08620 206 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 ENO2P09104 434 aaPredicted RBP8.46□□□□□ -1.05
TDP1-203ENST00000393454 PRDX3P30048 256 aaKnown RBP8.46□□□□□ -1.05
TDP1-203ENST00000393454 GDF5P43026 501 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 ADPRHP54922 357 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 FOXA1P55317 472 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 ARHGAP8P85298 464 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 CDK3Q00526 305 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 NUMA1Q14980 2115 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 IRF4Q15306 451 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 TBCCQ15814 346 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 BCL7AQ4VC05 210 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 METTL21CQ5VZV1 264 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 KIAA1161Q6NSJ0 714 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 TMEM92Q6UXU6 159 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 GPRIN3Q6ZVF9 776 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 NEK10Q6ZWH5 1172 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 GOLGA7Q7Z5G4 137 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 SYVN1Q86TM6 617 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 TREML1Q86YW5 311 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 PGBD3Q8N328 593 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 DCBLD1Q8N8Z6 715 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 CEP70Q8NHQ1 597 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 RHBDF1Q96CC6 855 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 MSANTD3Q96H12 275 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 FOPNLQ96NB1 174 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 CATSPER2Q96P56 530 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 SLC17A9Q9BYT1 436 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 CD244Q9BZW8 370 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 WDR26Q9H7D7 661 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 CA14Q9ULX7 337 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 PRKAB1Q9Y478 270 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 TIMM22Q9Y584 194 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 OR1A2Q9Y585 309 aa8.46□□□□□ -1.05
TDP1-203ENST00000393454 A0A1B0GTL3 188 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 SLC5A10A0PJK1 596 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 CAPN14A8MX76 684 aa8.45□□□□□ -1.06
TDP1-203ENST00000393454 H3BM21 787 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms