RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 ATXN7L2Q5T6C5 722 aaPredicted RBP9.5□□□□□ -0.89
COL6A3-204ENST00000392003 FAM219BQ5XKK7 198 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 SLC39A11Q8N1S5 342 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 DEPDC4Q8N2C3 294 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 ARL14EPQ8N8R7 260 aaPredicted RBP9.5□□□□□ -0.89
COL6A3-204ENST00000392003 TRMT2BQ96GJ1 504 aaKnown RBP9.5□□□□□ -0.89
COL6A3-204ENST00000392003 ZNF382Q96SR6 550 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 CIB1Q99828 191 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 HAUS8Q9BT25 410 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 TM6SF2Q9BZW4 377 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 MAGEE1Q9HCI5 957 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 FKBP14Q9NWM8 211 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 PLK2Q9NYY3 685 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 IL17CQ9P0M4 197 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 LHX3Q9UBR4 397 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 GNPTGQ9UJJ9 305 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 IKZF3Q9UKT9 509 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 TBX21Q9UL17 535 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 GPR45Q9Y5Y3 372 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 HTTP42858 3142 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 SNPHO15079 494 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 BNIP3LO60238 219 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 KLK8O60259 260 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 GABRR2P28476 465 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 RFC2P35250 354 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 CSKP41240 450 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 POLR2JP52435 117 aaKnown RBP9.5□□□□□ -0.89
COL6A3-204ENST00000392003 PDCD4Q53EL6 469 aaKnown RBP9.5□□□□□ -0.89
COL6A3-204ENST00000392003 MTX3Q5HYI7 312 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 HABP4Q5JVS0 413 aaKnown RBP9.5□□□□□ -0.89
COL6A3-204ENST00000392003 C6orf10Q5SRN2 563 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 TXNDC8Q6A555 127 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 C8orf82Q6P1X6 216 aaPredicted RBP9.5□□□□□ -0.89
COL6A3-204ENST00000392003 LYSMD3Q7Z3D4 306 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 NECAB2Q7Z6G3 386 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 SPPL2CQ8IUH8 684 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 PHYKPLQ8IUZ5 450 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 FIBCD1Q8N539 461 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 DNAJB14Q8TBM8 379 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 ACOX2Q99424 681 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 KCTD14Q9BQ13 255 aaPredicted RBP9.5□□□□□ -0.89
COL6A3-204ENST00000392003 GPATCH1Q9BRR8 931 aaKnown RBP9.5□□□□□ -0.89
COL6A3-204ENST00000392003 TMEM79Q9BSE2 394 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 C1orf50Q9BV19 199 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 ASB8Q9H765 288 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 ACTR3BQ9P1U1 418 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 CRLS1Q9UJA2 301 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 AK5Q9Y6K8 562 aa9.5□□□□□ -0.89
COL6A3-204ENST00000392003 RNF103-CHMP3A0A140T963 221 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 EFCAB14O75071 495 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 CXCL14O95715 111 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 FCGR1AP12314 374 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 PRDX3P30048 256 aaKnown RBP9.49□□□□□ -0.89
COL6A3-204ENST00000392003 MAPK8P45983 427 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 CDKL1Q00532 357 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 PRKG2Q13237 762 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 FUT11Q495W5 492 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 IL27RAQ6UWB1 636 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 FAM151BQ6UXP7 276 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 RBFAQ8N0V3 343 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 TRIML2Q8N7C3 387 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 FAM126AQ9BYI3 521 aaPredicted RBP9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ZFYVE1Q9HBF4 777 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ARMC1Q9NVT9 282 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 THEGQ9P2T0 379 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ABCD2Q9UBJ2 740 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 PRRC2BQ5JSZ5 2229 aaKnown RBP9.49□□□□□ -0.89
COL6A3-204ENST00000392003 C1orf232A0A0U1RR37 186 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 SAC3D1A6NKF1 404 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 IQCF5A8MTL0 148 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 INPP4BO15327 924 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ABLIM3O94929 683 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ZNF26P17031 533 aaPredicted RBP9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ATP6V1B2P21281 511 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 DGKAP23743 735 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 HMGCLP35914 325 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 NR6A1Q15406 480 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 IRAK1BP1Q5VVH5 260 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 LYPLAL1Q5VWZ2 237 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ERMP1Q7Z2K6 904 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 SERPINA9Q86WD7 417 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 DCAF4L2Q8NA75 395 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 WBP2Q969T9 261 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 VPS33AQ96AX1 596 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ZBTB18Q99592 522 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ZNF696Q9H7X3 374 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 CCM2LQ9NUG4 571 aaPredicted RBP9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ZIM2Q9NZV7 527 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 EVLQ9UI08 416 aaPredicted RBP9.49□□□□□ -0.89
COL6A3-204ENST00000392003 ANKRD36A6QL64 1941 aa9.49□□□□□ -0.89
COL6A3-204ENST00000392003 FAM234BA2RU67 622 aa9.48□□□□□ -0.89
COL6A3-204ENST00000392003 TPST1O60507 370 aa9.48□□□□□ -0.89
COL6A3-204ENST00000392003 PGLSO95336 258 aa9.48□□□□□ -0.89
COL6A3-204ENST00000392003 TRIM16O95361 564 aa9.48□□□□□ -0.89
COL6A3-204ENST00000392003 PRAMEF1O95521 474 aa9.48□□□□□ -0.89
COL6A3-204ENST00000392003 OTCP00480 354 aa9.48□□□□□ -0.89
COL6A3-204ENST00000392003 CAPNS1P04632 268 aa9.48□□□□□ -0.89
COL6A3-204ENST00000392003 ALPIP09923 528 aa9.48□□□□□ -0.89
COL6A3-204ENST00000392003 ITGB6P18564 788 aa9.48□□□□□ -0.89
COL6A3-204ENST00000392003 SLC6A2P23975 617 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms