RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 EIF4A2Q14240 407 aaKnown RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 E2F5Q15329 346 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 MTHFSDQ2M296 383 aaKnown RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 CTU2Q2VPK5 515 aaKnown RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 HIGD2BQ4VC39 106 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 XKR6Q5GH73 641 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 LRIF1Q5T3J3 769 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 SLC9C2Q5TAH2 1124 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 KRTAP5-1Q6L8H4 278 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 CORO6Q6QEF8 472 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 PAQR6Q6TCH4 344 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF534Q76KX8 674 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 ADIPOR2Q86V24 386 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 HOGA1Q86XE5 327 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 GALNT13Q8IUC8 556 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 MCEMP1Q8IX19 187 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 SLC39A11Q8N1S5 342 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 GPRC5AQ8NFJ5 357 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 MYRIPQ8NFW9 859 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 TRPC4APQ8TEL6 797 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 CCDC107Q8WV48 283 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 DYRK2Q92630 601 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 EGLN2Q96KS0 407 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 TBATAQ96M53 351 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 NSMCE3Q96MG7 304 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 DACH2Q96NX9 599 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 DDOQ99489 341 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 LRRC61Q9BV99 259 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 WWTR1Q9GZV5 400 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 MIS12Q9H081 205 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 DNAJC18Q9H819 358 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 PELI2Q9HAT8 420 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 CHMP1AQ9HD42 196 aaPredicted RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 ACKR4Q9NPB9 350 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 CHST11Q9NPF2 352 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 RPS10P5Q9NQ39 176 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF71Q9NQZ8 489 aaPredicted RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 MTMR10Q9NXD2 777 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 TEX10Q9NXF1 929 aaPredicted RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 DNAJB4Q9UDY4 337 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 LRWD1Q9UFC0 647 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 AMACRQ9UHK6 382 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 MUTYHQ9UIF7 546 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 TUBE1Q9UJT0 475 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 GRID1Q9ULK0 1009 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 NENFQ9UMX5 172 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 B3GALT5Q9Y2C3 310 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 GRIP1Q9Y3R0 1128 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 SPIN1Q9Y657 262 aaPredicted RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 DISP3Q9P2K9 1392 aa1.16□□□□□ -2.22
SNORD28B-201ENST00000390993 ZNF644Q9H582 1327 aaPredicted RBP1.15□□□□□ -2.22
SNORD28B-201ENST00000390993 A0A087X002 238 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 TMEM8BA6NDV4 472 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 ANKRD61A6NGH8 418 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 NPIPB15A6NHN6 443 aaPredicted RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 LRRC72A6NJI9 287 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 A6NLC8 198 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 KRTAP16-1A8MUX0 517 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 EPHB6O15197 1021 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 SLC22A2O15244 555 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 IPO8O15397 1037 aaKnown RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 TSPAN1O60635 241 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 RNASEH2AO75792 299 aaKnown RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 RTN3O95197 1032 aaPredicted RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 NADKO95544 446 aaPredicted RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 DDX58O95786 925 aaKnown RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 HPRP00739 348 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 CLEC3BP05452 202 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 GJA1P17302 382 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 CHMP24386 653 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 PBX3P40426 434 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 TSFMP43897 325 aaKnown RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 PGFP49763 221 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 CCR9P51686 369 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 ARSEP51690 589 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 CASP6P55212 293 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 PAX9P55771 341 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 TMEM50BP56557 158 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 RPS3AP61247 264 aaKnown RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 CX3CL1P78423 397 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 SP3Q02447 781 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 CEBPZQ03701 1054 aaKnown RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 IKQ13123 557 aaPredicted RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 GRAPQ13588 217 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 FASTKD3Q14CZ7 662 aaKnown RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 NECTIN1Q15223 517 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 RAB6CQ53S08 254 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 RARS2Q5T160 578 aaKnown RBP1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 CYP4A22Q5TCH4 519 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 C20orf194Q5TEA3 1177 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 ZNF774Q6NX45 483 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 NOTUMQ6P988 496 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 NCEH1Q6PIU2 408 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 CYP20A1Q6UW02 462 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 SUSD1Q6UWL2 747 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 CHMP1BQ7LBR1 199 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 TSPAN33Q86UF1 283 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 LMNTD2Q8IXW0 634 aa1.15□□□□□ -2.23
SNORD28B-201ENST00000390993 CRYBG2Q8N1P7 616 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms