RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 RIPPLY3P57055 190 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 IL2P60568 153 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FKBP3Q00688 224 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CNTN2Q02246 1040 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ACY1Q03154 408 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FMODQ06828 376 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PLA2G7Q13093 441 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 STK3Q13188 491 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF177Q13360 481 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 GGTLC2Q14390 218 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF267Q14586 743 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF460Q14592 562 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SART3Q15020 963 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ACOX1Q15067 660 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 DLG2Q15700 870 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TCTN1Q2MV58 587 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 USP41Q3LFD5 358 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ITPRIPL2Q3MIP1 535 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 COX19Q49B96 90 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 KHDC1Q4VXA5 237 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SPECC1Q5M775 1068 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM102BQ5T8I3 360 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CYP4A22Q5TCH4 519 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 BROXQ5VW32 411 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SHEQ5VZ18 495 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CES4AQ5XG92 561 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM90A2PQ658T7 463 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RAP1GAP2Q684P5 730 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 LMBRD2Q68DH5 695 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 LEMD1Q68G75 181 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 MRNIPQ6NTE8 343 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 WDR93Q6P2C0 686 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ACSM6Q6P461 480 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM88Q6PEY1 159 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 KCTD18Q6PI47 426 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 DARS2Q6PI48 645 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PACS1Q6VY07 963 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC36A4Q6YBV0 504 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM26Q6ZUK4 368 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PAQR9Q6ZVX9 377 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 UNC13DQ70J99 1090 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 BTN2A1Q7KYR7 527 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PCGF5Q86SE9 256 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ADGRG6Q86SQ4 1221 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TRIM74Q86UV6 250 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TRIM73Q86UV7 250 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CATSPERDQ86XM0 798 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 LRRC49Q8IUZ0 686 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ERI1Q8IV48 349 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF34Q8IZ26 560 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CLASRPQ8N2M8 674 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FTMTQ8N4E7 242 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF383Q8NA42 475 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 USP38Q8NB14 1042 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ACBD4Q8NC06 268 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SMC1BQ8NDV3 1235 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZSWIM2Q8NEG5 633 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 OR6F1Q8NGZ6 308 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 OR4C3Q8NH37 302 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 OR6X1Q8NH79 312 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CFAP61Q8NHU2 1237 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 VANGL1Q8TAA9 524 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 UBALD1Q8TB05 177 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RAET1EQ8TD07 263 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 BLOC1S5Q8TDH9 187 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 C10orf105Q8TEF2 133 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TGFBRAP1Q8WUH2 860 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 JDP2Q8WYK2 163 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CHCHD10Q8WYQ3 142 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 OVCA2Q8WZ82 227 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RAPGEF4Q8WZA2 1011 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 HSD17B8Q92506 261 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SYN2Q92777 582 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RPUSD4Q96CM3 377 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RNF183Q96D59 192 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC47A1Q96FL8 570 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF486Q96H40 463 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 NSL1Q96IY1 281 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC35E1Q96K37 410 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 EGLN2Q96KS0 407 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM167AQ96KS9 214 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 GPR101Q96P66 508 aaPredicted RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TEFMQ96QE5 360 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 PPP1R9BQ96SB3 815 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 MTERF1Q99551 399 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 EIF3CQ99613 913 aaKnown RBP-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RETNLBQ9BQ08 111 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM173AQ9BQD7 235 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 OVOL2Q9BRP0 275 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FUT8Q9BYC5 575 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 NMNAT2Q9BZQ4 307 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC13A1Q9BZW2 595 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RAB33BQ9H082 229 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 RACGAP1Q9H0H5 632 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC12A5Q9H2X9 1139 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM83DQ9H4H8 585 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 MARCH7Q9H992 704 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 TBC1D17Q9HA65 648 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 CNGB3Q9NQW8 809 aa-0.38□□□□□ -2.47
TRAJ28-201ENST00000390509 SIRT7Q9NRC8 400 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms