RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 CARFQ8N187 725 aa22.48■■□□□ 1.19
U2AF1-202ENST00000380276 LILRA3Q8N6C8 439 aaPredicted RBP22.48■■□□□ 1.19
U2AF1-202ENST00000380276 OR4K2Q8NGD2 314 aa22.48■■□□□ 1.19
U2AF1-202ENST00000380276 ZFPM2Q8WW38 1151 aa22.48■■□□□ 1.19
U2AF1-202ENST00000380276 QKIQ96PU8 341 aaKnown RBP eCLIP22.48■■□□□ 1.19
U2AF1-202ENST00000380276 FERD3LQ96RJ6 166 aa22.48■■□□□ 1.19
U2AF1-202ENST00000380276 APOL2Q9BQE5 337 aa22.48■■□□□ 1.19
U2AF1-202ENST00000380276 SRMSQ9H3Y6 488 aa22.48■■□□□ 1.19
U2AF1-202ENST00000380276 BTRCQ9Y297 605 aa22.48■■□□□ 1.19
U2AF1-202ENST00000380276 MAP4K5Q9Y4K4 846 aa22.48■■□□□ 1.19
U2AF1-202ENST00000380276 HEBP2Q9Y5Z4 205 aa22.48■■□□□ 1.19
U2AF1-202ENST00000380276 H7C0C1 242 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 PSTPIP1O43586 416 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 DPM1O60762 260 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 SRP72O76094 671 aaKnown RBP22.47■■□□□ 1.19
U2AF1-202ENST00000380276 RALBP11234 206 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 ATP5OP48047 213 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 TMPRSS15P98073 1019 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 INPP5JQ15735 1006 aaPredicted RBP22.47■■□□□ 1.19
U2AF1-202ENST00000380276 BCL7AQ4VC05 210 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 PRR30Q53SZ7 412 aaPredicted RBP22.47■■□□□ 1.19
U2AF1-202ENST00000380276 CCDC181Q5TID7 509 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 FDCSPQ8NFU4 85 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 LCN9Q8WX39 176 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 LRFN5Q96NI6 719 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 C10orf88Q9H8K7 445 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 ACTR5Q9H9F9 607 aaPredicted RBP22.47■■□□□ 1.19
U2AF1-202ENST00000380276 CASS4Q9NQ75 786 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 C1GALT1Q9NS00 363 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 TRHDEQ9UKU6 1024 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 POMT2Q9UKY4 750 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 TCFL5Q9UL49 500 aa22.47■■□□□ 1.19
U2AF1-202ENST00000380276 A1L4Q6 167 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 KLHL33A6NCF5 533 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 HACD1B0YJ81 288 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 SORBS2O94875 1100 aaKnown RBP22.46■■□□□ 1.19
U2AF1-202ENST00000380276 RAB40ALP0C0E4 278 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 PYGMP11217 842 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 LMAN1P49257 510 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 RAPSNQ13702 412 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 TAF1AQ15573 450 aaPredicted RBP22.46■■□□□ 1.19
U2AF1-202ENST00000380276 KYNUQ16719 465 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 PTCHD3Q3KNS1 767 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 SYTL1Q8IYJ3 562 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 ACVR1CQ8NER5 493 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 OR1L3Q8NH93 324 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 HM13Q8TCT9 377 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 CCM2Q9BSQ5 444 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 NLNQ9BYT8 704 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 SLC29A3Q9BZD2 475 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 KLHL25Q9H0H3 589 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 GOLPH3Q9H4A6 298 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 FAM96AQ9H5X1 160 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 MLXIPLQ9NP71 852 aa22.46■■□□□ 1.19
U2AF1-202ENST00000380276 hCG_1818297A0A087WSY0 165 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 MACROD2A1Z1Q3 448 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 CCDC66A2RUB6 948 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 MATN2O00339 956 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 SEMA7AO75326 666 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 ANXA9O76027 345 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 ZRANB2O95218 330 aaKnown RBP eCLIP22.45■■□□□ 1.18
U2AF1-202ENST00000380276 RBL1P28749 1068 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 VAV2P52735 878 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 TAZQ16635 292 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 ITPRIPL1Q6GPH6 555 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 JMJD6Q6NYC1 403 aaPredicted RBP22.45■■□□□ 1.18
U2AF1-202ENST00000380276 ZNF517Q6ZMY9 492 aaPredicted RBP22.45■■□□□ 1.18
U2AF1-202ENST00000380276 ADAMTS17Q8TE56 1095 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 RBM41Q96IZ5 413 aaKnown RBP22.45■■□□□ 1.18
U2AF1-202ENST00000380276 NUDT9Q9BW91 350 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 HEMGNQ9BXL5 484 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 GBA3Q9H227 469 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 PCMTD2Q9NV79 361 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 GPR83Q9NYM4 423 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 SERTAD3Q9UJW9 196 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 PCDHGB7Q9Y5F8 929 aa22.45■■□□□ 1.18
U2AF1-202ENST00000380276 C9J4A7 227 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 CFAP99D6REC4 459 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 IFRD1O00458 451 aaPredicted RBP22.44■■□□□ 1.18
U2AF1-202ENST00000380276 MFAP3LO75121 409 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 ST6GAL1P15907 406 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 ITGA1P56199 1179 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 MRPL49Q13405 166 aaKnown RBP22.44■■□□□ 1.18
U2AF1-202ENST00000380276 OLIG2Q13516 323 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 EIF2S3LQ2VIR3 472 aaKnown RBP22.44■■□□□ 1.18
U2AF1-202ENST00000380276 PAPD7Q5XG87 772 aaKnown RBP22.44■■□□□ 1.18
U2AF1-202ENST00000380276 HOOK3Q86VS8 718 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 OR13C4Q8NGS5 318 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 PRR7Q8TB68 274 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 N4BP2L2Q92802 583 aaPredicted RBP22.44■■□□□ 1.18
U2AF1-202ENST00000380276 ULK4Q96C45 1275 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 LINC00615Q96LM1 132 aaPredicted RBP22.44■■□□□ 1.18
U2AF1-202ENST00000380276 FERMT1Q9BQL6 677 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 ALG6Q9Y672 507 aa22.44■■□□□ 1.18
U2AF1-202ENST00000380276 C5orf60A6NFR6 353 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 BTN3A1O00481 513 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 CRTAMO95727 393 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 ITGALP20701 1170 aa22.43■■□□□ 1.18
U2AF1-202ENST00000380276 PRDX3P30048 256 aaKnown RBP22.43■■□□□ 1.18
U2AF1-202ENST00000380276 OTX2P32243 289 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms