RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 ANXA6P08133 673 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 GSTM1P09488 218 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 AP1S2P56377 157 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 ERVK-8P63133 956 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 TNK2Q07912 1038 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 ZC3H7AQ8IWR0 971 aaKnown RBP14.26□□□□□ -0.13
TCOF1-202ENST00000377797 LIX1Q8N485 282 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 LRRC72A6NJI9 287 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 DYNC1I2Q13409 638 aaKnown RBP14.26□□□□□ -0.13
TCOF1-202ENST00000377797 AHCYL2Q96HN2 611 aaKnown RBP14.26□□□□□ -0.13
TCOF1-202ENST00000377797 TRIT1Q9H3H1 467 aaKnown RBP14.26□□□□□ -0.13
TCOF1-202ENST00000377797 REEP1Q9H902 201 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 POPDC3Q9HBV1 291 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 CACNA2D2Q9NY47 1150 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 NDOR1Q9UHB4 597 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 RASSF9O75901 435 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 GSSP48637 474 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 CDKN2DP55273 166 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 LRRC26Q2I0M4 334 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 CCDC157Q569K6 752 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 ZNF789Q5FWF6 425 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 ZNF678Q5SXM1 525 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 SPESP1Q6UW49 350 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 FRMD7Q6ZUT3 714 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 SPPL2CQ8IUH8 684 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 UTP15Q8TED0 518 aaKnown RBP14.26□□□□□ -0.13
TCOF1-202ENST00000377797 RMND5BQ96G75 393 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-202ENST00000377797 TRMT2BQ96GJ1 504 aaKnown RBP14.26□□□□□ -0.13
TCOF1-202ENST00000377797 SLC46A2Q9BY10 475 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 SLC32A1Q9H598 525 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 H2AFY2Q9P0M6 372 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-202ENST00000377797 SLC22A14Q9Y267 594 aa14.26□□□□□ -0.13
TCOF1-202ENST00000377797 PI15O43692 258 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 POP7O75817 140 aaKnown RBP14.25□□□□□ -0.13
TCOF1-202ENST00000377797 RASGRP1O95267 797 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 PRSS56P0CW18 603 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 TNNI3P19429 210 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 TLX1P31314 330 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-202ENST00000377797 LIPEQ05469 1076 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 FAM174BQ3ZCQ3 159 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 ANXA8L1Q5VT79 327 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 LPCAT4Q643R3 524 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 GLYATQ6IB77 296 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 ANKRD46Q86W74 232 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 MRPL43Q8N983 215 aaKnown RBP14.25□□□□□ -0.13
TCOF1-202ENST00000377797 SIPA1Q96FS4 1042 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 TTLL2Q9BWV7 592 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 WDR26Q9H7D7 661 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 SFXN1Q9H9B4 322 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 HEPACAM2A8MVW5 462 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 SLC22A2O15244 555 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 SMAD6O43541 496 aaKnown RBP14.25□□□□□ -0.13
TCOF1-202ENST00000377797 TIPRLO75663 272 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 ZNF805Q5CZA5 627 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 ACSBG2Q5FVE4 666 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 PROX1Q92786 737 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 EBPLQ9BY08 206 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 DZANK1Q9NVP4 752 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 VPS4AQ9UN37 437 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 DYRK3O43781 588 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 BMP10O95393 424 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 PRPS2P11908 318 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 AOC1P19801 751 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 ASMTP46597 345 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 FBXW4P57775 412 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 DNAJB13P59910 316 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 NFKB2Q00653 900 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 UBE3AQ05086 875 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 SEMA3BQ13214 749 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 PWP1Q13610 501 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 LINC01599Q8WXQ3 324 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 SMARCD2Q92925 531 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 KCNA7Q96RP8 456 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 MAGEL2Q9UJ55 1249 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 RPS6KA6Q9UK32 745 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 ENO4A6NNW6 628 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 TNFAIP8O95379 198 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 CHRM1P11229 460 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-202ENST00000377797 ACP5P13686 325 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 RPS14P62263 151 aaKnown RBP14.25□□□□□ -0.13
TCOF1-202ENST00000377797 SKP1P63208 163 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 FGD3Q5JSP0 725 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 ZNF655Q8N720 491 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-202ENST00000377797 DACT3Q96B18 629 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-202ENST00000377797 DHRS4Q9BTZ2 278 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 KIAA1217Q5T5P2 1943 aa14.25□□□□□ -0.13
TCOF1-202ENST00000377797 TTC34A8MYJ7 566 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 GSRP00390 522 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 CD1DP15813 335 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 GCAP28676 217 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ETV3P41162 512 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 AGTR2P50052 363 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ILF3Q12906 894 aaKnown RBP eCLIP14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ADRM1Q16186 407 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 PTCHD3Q3KNS1 767 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 CCNYL2Q5T2Q4 361 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 NADSYN1Q6IA69 706 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 CYP2U1Q7Z449 544 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 OR4F6Q8NGB9 312 aa14.24□□□□□ -0.13
TCOF1-202ENST00000377797 ZFP28Q8NHY6 868 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms