RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 HEBP2Q9Y5Z4 205 aa12.9□□□□□ -0.34
TIMP1-202ENST00000377017 GOLGA6L10A6NI86 522 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 TRIM49D1C9J1S8 452 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 CDX4O14627 284 aaPredicted RBP12.89□□□□□ -0.35
TIMP1-202ENST00000377017 RPN2P04844 631 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 ZNF37AP17032 561 aaPredicted RBP12.89□□□□□ -0.35
TIMP1-202ENST00000377017 KRT15P19012 456 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 TGM1P22735 817 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 TYK2P29597 1187 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 GRK6P43250 576 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 PREPP48147 710 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 RPIAP49247 311 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 BIRC2Q13490 618 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 GBX1Q14549 363 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 ZKSCAN8Q15776 578 aaPredicted RBP12.89□□□□□ -0.35
TIMP1-202ENST00000377017 KRT71Q3SY84 523 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 ZCCHC8Q6NZY4 707 aaKnown RBP12.89□□□□□ -0.35
TIMP1-202ENST00000377017 PAQR3Q6TCH7 311 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 ABRAXAS1Q6UWZ7 409 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 NAPRTQ6XQN6 538 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 KANSL1Q7Z3B3 1105 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 TBC1D1Q86TI0 1168 aaPredicted RBP12.89□□□□□ -0.35
TIMP1-202ENST00000377017 TRIM48Q8IWZ4 208 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 CPNE9Q8IYJ1 553 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 IQCKQ8N0W5 287 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 MYO1HQ8N1T3 1032 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 SLC25A45Q8N413 288 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 LILRA3Q8N6C8 439 aaPredicted RBP12.89□□□□□ -0.35
TIMP1-202ENST00000377017 ACVR1CQ8NER5 493 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 OR4C6Q8NH72 309 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 GIMAP7Q8NHV1 300 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 ZIM3Q96PE6 472 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 WWP1Q9H0M0 922 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 OR52A5Q9H2C5 316 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 CAB39LQ9H9S4 337 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 PRDM8Q9NQV8 689 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 SNX15Q9NRS6 342 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 TBK1Q9UHD2 729 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 RAPGEFL1Q9UHV5 662 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 ST14Q9Y5Y6 855 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 CABIN1Q9Y6J0 2220 aa12.89□□□□□ -0.35
TIMP1-202ENST00000377017 A0A087X1B8 175 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 GFRA3O60609 400 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 MPOP05164 745 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 MPC1LP0DKB6 136 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 NDUFS1P28331 727 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 PDHA2P29803 388 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 SLC26A3P40879 764 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 TIAL1Q01085 375 aaKnown RBP eCLIP12.88□□□□□ -0.35
TIMP1-202ENST00000377017 ZNF844Q08AG5 666 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 KRT33BQ14525 404 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 ACSBG2Q5FVE4 666 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 CEP85LQ5SZL2 805 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 IYDQ6PHW0 289 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 TIFABQ6ZNK6 161 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 SLC9B2Q86UD5 537 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 CEP97Q8IW35 865 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 ARL10Q8N8L6 244 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 MAPK15Q8TD08 544 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 ISL2Q96A47 359 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 CXorf40BQ96DE9 158 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 LINGO1Q96FE5 620 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 PKNOX2Q96KN3 472 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 C12orf66Q96MD2 445 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 TSNARE1Q96NA8 513 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 SLC30A3Q99726 388 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 ACBD3Q9H3P7 528 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 POT1Q9NUX5 634 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 SIRPGQ9P1W8 387 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 GALPQ9UBC7 116 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 CTNNAL1Q9UBT7 734 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 LGALS13Q9UHV8 139 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 PSMD13Q9UNM6 376 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 CDYLQ9Y232 598 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 ACOT9Q9Y305 439 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 NFS1Q9Y697 457 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 COLEC10Q9Y6Z7 277 aa12.88□□□□□ -0.35
TIMP1-202ENST00000377017 ARHGEF17Q96PE2 2063 aaPredicted RBP12.88□□□□□ -0.35
TIMP1-202ENST00000377017 A0A096LPK6 155 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 HMX2A2RU54 273 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 A6NCN8 305 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 PABPN1LA6NDY0 278 aaKnown RBP12.87□□□□□ -0.35
TIMP1-202ENST00000377017 C4orf47A7E2U8 309 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 RGS16O15492 202 aaPredicted RBP12.87□□□□□ -0.35
TIMP1-202ENST00000377017 PHGDHO43175 533 aaKnown RBP12.87□□□□□ -0.35
TIMP1-202ENST00000377017 KDM1AO60341 852 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 MT-ND3P03897 115 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 ALDOAP04075 364 aaKnown RBP12.87□□□□□ -0.35
TIMP1-202ENST00000377017 MYZAPP0CAP1 466 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 MTHFD1P11586 935 aaKnown RBP12.87□□□□□ -0.35
TIMP1-202ENST00000377017 MAGEA12P43365 314 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 ZNF460Q14592 562 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 CAPRIN2Q6IMN6 1127 aaKnown RBP12.87□□□□□ -0.35
TIMP1-202ENST00000377017 TTC23LQ6PF05 361 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 OGFOD3Q6PK18 319 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 UNC5DQ6UXZ4 953 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 CMC1Q7Z7K0 106 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 RBM12BQ8IXT5 1001 aaKnown RBP12.87□□□□□ -0.35
TIMP1-202ENST00000377017 NAGSQ8N159 534 aa12.87□□□□□ -0.35
TIMP1-202ENST00000377017 SFRP1Q8N474 314 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms