RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FNDC3AQ9Y2H6 1198 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 TMED5Q9Y3A6 229 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 TTC3P53804 2025 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 ZNF99A8MXY4 864 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 OXSR1O95747 527 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 ATXN1LP0C7T5 689 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 GGT1P19440 569 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 TYMPP19971 482 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 CCL23P55773 120 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 IL5RAQ01344 420 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 IL1RL1Q01638 556 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 TCTN1Q2MV58 587 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 TIGD5Q53EQ6 642 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 XKR7Q5GH72 579 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 CD300LGQ6UXG3 332 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 DLEU7Q6UYE1 221 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 CCDC81Q6ZN84 652 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 GPRIN3Q6ZVF9 776 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 EFL1Q7Z2Z2 1120 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 DSG4Q86SJ6 1040 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 OR2T12Q8NG77 320 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 CNIH3Q8TBE1 160 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 GPR21Q99679 349 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 SEMA3CQ99985 751 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 NUSAP1Q9BXS6 441 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 UGT2B28Q9BY64 529 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 DNAJB9Q9UBS3 223 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 ADGRE2Q9UHX3 823 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 ZNF229Q9UJW7 825 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 RPP40O75818 363 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 PRSS23O95084 383 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 HPRP00739 348 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 G6PDP11413 515 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 HOXB8P17481 243 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 FSHRP23945 695 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 MAPRE1Q15691 268 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 NKG7Q16617 165 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 TMEM236Q5W0B7 351 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 AFMIDQ63HM1 303 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 ANKRD13BQ86YJ7 626 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 LRRC49Q8IUZ0 686 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 SCML4Q8N228 414 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 OR56A4Q8NGH8 313 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 OR10A6Q8NH74 314 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 S100ZQ8WXG8 99 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 FUBP1Q96AE4 644 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 ISG20Q96AZ6 181 aaKnown RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 SLC47A1Q96FL8 570 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 ITCHQ96J02 903 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 SUSD3Q96L08 255 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 TRIM62Q9BVG3 475 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 OSBPL10Q9BXB5 764 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 PAK1IP1Q9NWT1 392 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 CD274Q9NZQ7 290 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.92□□□□□ -0.66
CCDC40-203ENST00000374877 PCTPQ9UKL6 214 aa10.92□□□□□ -0.66
CCDC40-203ENST00000374877 LOC100130705A0A1B0GUX0 176 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-203ENST00000374877 DFNA5O60443 496 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 MLYCDO95822 493 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 TIMP1P01033 207 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 UGT2B4P06133 528 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 SUOXP51687 545 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 STC1P52823 247 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 GABARAPL2P60520 117 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 VBP1P61758 197 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 EPS8Q12929 822 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 NR6A1Q15406 480 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 ZNF362Q5T0B9 420 aaPredicted RBP10.91□□□□□ -0.66
CCDC40-203ENST00000374877 PIK3R6Q5UE93 754 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 METTL23Q86XA0 190 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 OR52B6Q8NGF0 335 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 FRS2Q8WU20 508 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 RORBQ92753 470 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 NCLNQ969V3 563 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 FAM162AQ96A26 154 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 CASD1Q96PB1 797 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 RBM4BQ9BQ04 359 aaKnown RBP10.91□□□□□ -0.66
CCDC40-203ENST00000374877 RBM4Q9BWF3 364 aaKnown RBP10.91□□□□□ -0.66
CCDC40-203ENST00000374877 DERL2Q9GZP9 239 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 ACTR8Q9H981 624 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 OSER1Q9NX31 292 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 ASB1Q9Y576 335 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 EFCAB14O75071 495 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 ALOX5P09917 674 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 HTR7P34969 479 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 GRIK1P39086 918 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 PPP2R2BQ00005 443 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 FXNQ16595 210 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 ALFQ53S48 1182 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 IL27RAQ6UWB1 636 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 PGBD5Q8N414 524 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 GIPC2Q8TF65 315 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 RDH12Q96NR8 316 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 RTP3Q9BQQ7 232 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 TMEM175Q9BSA9 504 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 FEM1AQ9BSK4 669 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 SMOC2Q9H3U7 446 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 SMPD4Q9NXE4 827 aa10.91□□□□□ -0.66
CCDC40-203ENST00000374877 AASSQ9UDR5 926 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms