RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ARL5AQ9Y689 179 aa13.42□□□□□ -0.26
CXCL12-202ENST00000374426 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 SLC9B1P1A6NJY1 282 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 TCP11X1B4DZS4 312 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 TMEM63AO94886 807 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 AGTP01019 485 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 COMTP21964 271 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 ITGA1P56199 1179 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 BCL7AQ4VC05 210 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 FAM198BQ6UWH4 519 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 SPOCD1Q6ZMY3 1216 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 DAAM2Q86T65 1068 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 OR1L3Q8NH93 324 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 P3H4Q92791 437 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 HAUS1Q96CS2 278 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 LINC00615Q96LM1 132 aaPredicted RBP13.41□□□□□ -0.26
CXCL12-202ENST00000374426 QKIQ96PU8 341 aaKnown RBP eCLIP13.41□□□□□ -0.26
CXCL12-202ENST00000374426 GORASP1Q9BQQ3 440 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 NUDT9Q9BW91 350 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 FSD1LQ9BXM9 530 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 C1GALT1Q9NS00 363 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 PCMTD2Q9NV79 361 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 COLEC10Q9Y6Z7 277 aa13.41□□□□□ -0.26
CXCL12-202ENST00000374426 ABCA12Q86UK0 2595 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 ZNF185O15231 689 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 SPOPO43791 374 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 DPM1O60762 260 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 SRP72O76094 671 aaKnown RBP13.4□□□□□ -0.26
CXCL12-202ENST00000374426 POLBP06746 335 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 MSL3P1P0C860 447 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 CDH3P22223 829 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 MRPL49Q13405 166 aaKnown RBP13.4□□□□□ -0.26
CXCL12-202ENST00000374426 GSE1Q14687 1217 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 TCEAL1Q15170 157 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 SLC6A19Q695T7 634 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 SYTL1Q8IYJ3 562 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 CFAP206Q8IYR0 622 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 ZBTB2Q8N680 514 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 RBMXL3Q8N7X1 1067 aaKnown RBP13.4□□□□□ -0.26
CXCL12-202ENST00000374426 OR4K2Q8NGD2 314 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 CLIP3Q96DZ5 547 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 CCDC42Q96M95 316 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 NRTNQ99748 197 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 MFRPQ9BY79 579 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 ASB8Q9H765 288 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 NHEJ1Q9H9Q4 299 aaPredicted RBP13.4□□□□□ -0.26
CXCL12-202ENST00000374426 FANCEQ9HB96 536 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 ABHD10Q9NUJ1 306 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 ZNHIT6Q9NWK9 470 aaKnown RBP13.4□□□□□ -0.26
CXCL12-202ENST00000374426 CUEDC1Q9NWM3 386 aaPredicted RBP13.4□□□□□ -0.26
CXCL12-202ENST00000374426 RSPH14Q9UHP6 348 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 FKBPLQ9UIM3 349 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 PCSK5Q92824 1860 aa13.4□□□□□ -0.26
CXCL12-202ENST00000374426 hCG_1818297A0A087WSY0 165 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 A6NL46 340 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 AGAP14A8MT82 685 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 TMEM150CB9EJG8 249 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 MATN2O00339 956 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 PSTPIP1O43586 416 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 TPM3P06753 285 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 PYGMP11217 842 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 ST6GAL1P15907 406 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 CYP2A7P20853 494 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 NDUFS1P28331 727 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 PRDX3P30048 256 aaKnown RBP13.39□□□□□ -0.27
CXCL12-202ENST00000374426 PREPP48147 710 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 LMAN1P49257 510 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 PRLHRP49683 370 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 VAV2P52735 878 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 XIAPP98170 497 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 PRKAA1Q13131 559 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 OLIG2Q13516 323 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 TRIM14Q14142 442 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 KRT33BQ14525 404 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 TAF1AQ15573 450 aaPredicted RBP13.39□□□□□ -0.27
CXCL12-202ENST00000374426 EIF2S3LQ2VIR3 472 aaKnown RBP13.39□□□□□ -0.27
CXCL12-202ENST00000374426 PTCHD3Q3KNS1 767 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 TFDP3Q5H9I0 405 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 TMEM102Q8N9M5 508 aaPredicted RBP13.39□□□□□ -0.27
CXCL12-202ENST00000374426 GLIS1Q8NBF1 620 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 ACVR1CQ8NER5 493 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 HM13Q8TCT9 377 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 LCN9Q8WX39 176 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 CCM2Q9BSQ5 444 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 FICDQ9BVA6 458 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 PITPNM3Q9BZ71 974 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 GBA3Q9H227 469 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 SRMSQ9H3Y6 488 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 GOLPH3Q9H4A6 298 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 ACTR5Q9H9F9 607 aaPredicted RBP13.39□□□□□ -0.27
CXCL12-202ENST00000374426 SYTL2Q9HCH5 934 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 SLAMF7Q9NQ25 335 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 GPR83Q9NYM4 423 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 TRHDEQ9UKU6 1024 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 HEBP2Q9Y5Z4 205 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 CACNA1DQ01668 2161 aa13.39□□□□□ -0.27
CXCL12-202ENST00000374426 POLEQ07864 2286 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 A1L4Q6 167 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 GSAPA4D1B5 854 aa13.38□□□□□ -0.27
CXCL12-202ENST00000374426 C5orf60A6NFR6 353 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms