RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ZNF829Q3KNS6 432 aaPredicted RBP17.15■□□□□ 0.34
PTPRU-202ENST00000373779 POM121L1PQ3SYA9 428 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 ARMC6Q6NXE6 501 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 ZNF773Q6PK81 442 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 OR52J3Q8NH60 311 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 KIAA1191Q96A73 305 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 ZNF607Q96SK3 696 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 A0A1W2PPW3 197 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 H0YJX3 145 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 H3BNH8 94 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 DUSP11O75319 330 aaKnown RBP17.15■□□□□ 0.34
PTPRU-202ENST00000373779 TNFRSF21O75509 655 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 SERPINB7O75635 380 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 SORBS2O94875 1100 aaKnown RBP17.15■□□□□ 0.34
PTPRU-202ENST00000373779 ANXA4P09525 319 aaPredicted RBP17.15■□□□□ 0.34
PTPRU-202ENST00000373779 PTSQ03393 145 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 PDCD4Q53EL6 469 aaKnown RBP17.15■□□□□ 0.34
PTPRU-202ENST00000373779 ZZZ3Q8IYH5 903 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 TMEM130Q8N3G9 435 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 MINDY2Q8NBR6 621 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 ZNF420Q8TAQ5 688 aaPredicted RBP17.15■□□□□ 0.34
PTPRU-202ENST00000373779 TRIM17Q9Y577 477 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 PRKD3O94806 890 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 CLIC3O95833 236 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 PGGT1BP53609 377 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 CSNK2BP67870 215 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 MOGQ16653 247 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 DLK2Q6UY11 383 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 RAVER1Q8IY67 606 aaKnown RBP17.15■□□□□ 0.34
PTPRU-202ENST00000373779 ZFP28Q8NHY6 868 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 LYVE1Q9Y5Y7 322 aa17.15■□□□□ 0.34
PTPRU-202ENST00000373779 G3V2L1 256 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 NBNO60934 754 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 NR2F6P10588 404 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 ENTPD1P49961 510 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 CHIT1Q13231 466 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 CAMKK1Q8N5S9 505 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 CNOT11Q9UKZ1 510 aaKnown RBP17.14■□□□□ 0.33
PTPRU-202ENST00000373779 ITGB4P16144 1822 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 LAMB1P07942 1786 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 J3QRK9 145 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 EDNRBP24530 442 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 MAGEA6P43360 314 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 GHRHRQ02643 423 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 FAM131AQ6UXB0 335 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 NANOGNBQ7Z5D8 188 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 FCGR1BQ92637 280 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 FBXL8Q96CD0 374 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 OMA1Q96E52 524 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 CLEC4MQ9H2X3 399 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-202ENST00000373779 NMUR1Q9HB89 426 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 CCM2LQ9NUG4 571 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-202ENST00000373779 STC1P52823 247 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 RAET1GQ6H3X3 334 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 IPCEF1Q8WWN9 437 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-202ENST00000373779 STON2Q8WXE9 905 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 TIFAQ96CG3 184 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 ZNF558Q96NG5 402 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 COPS4Q9BT78 406 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 AASDHPPTQ9NRN7 309 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 ZNF221Q9UK13 617 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 TESMINQ9Y4I5 508 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 PEX16Q9Y5Y5 336 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 IQCF5A8MTL0 148 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 TFECO14948 347 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-202ENST00000373779 ERN1O75460 977 aaKnown RBP17.14■□□□□ 0.33
PTPRU-202ENST00000373779 FKBP1BP68106 108 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 HMGCS1Q01581 520 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 GNA13Q14344 377 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 OR52E8Q6IFG1 317 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 CAPN13Q6MZZ7 669 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-202ENST00000373779 XKR5Q6UX68 686 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-202ENST00000373779 TMPRSS11BQ86T26 416 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 DRAXINQ8NBI3 349 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-202ENST00000373779 FAIM2Q9BWQ8 316 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 RRAGCQ9HB90 399 aa17.14■□□□□ 0.33
PTPRU-202ENST00000373779 LCHNA4D1U4 455 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 EFCAB9A8MZ26 197 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 BEST1O76090 585 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 LEPRP48357 1165 aaKnown RBP17.13■□□□□ 0.33
PTPRU-202ENST00000373779 NPTX1Q15818 432 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 FNDC3BQ53EP0 1204 aaKnown RBP17.13■□□□□ 0.33
PTPRU-202ENST00000373779 RNF19BQ6ZMZ0 732 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 MAPK15Q8TD08 544 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 B3GALT6Q96L58 329 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 SORT1Q99523 831 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 COL18A1P39060 1754 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 ACVRL1P37023 503 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 GPR1P46091 355 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 SRSF11Q05519 484 aaKnown RBP17.13■□□□□ 0.33
PTPRU-202ENST00000373779 PLD4Q96BZ4 506 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 SLC45A3Q96JT2 553 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 FZD9O00144 591 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 ENPP3O14638 875 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 GATAD2AQ86YP4 633 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 SPATA2Q9UM82 520 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 SLC28A2O43868 658 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 BMP10O95393 424 aa17.13■□□□□ 0.33
PTPRU-202ENST00000373779 NPPAP01160 153 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms