RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 BIRC8Q96P09 236 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 TLR6Q9Y2C9 796 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 ADCY10Q96PN6 1610 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 WEE1P30291 646 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 TERB2Q8NHR7 220 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 MAP3K8P41279 467 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 HMGCS2P54868 508 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 FAM196AQ6ZSG2 479 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 PBDC1Q9BVG4 233 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 TMED9Q9BVK6 235 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 EQTNQ9NQ60 294 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 GSKIPQ9P0R6 139 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 USP20Q9Y2K6 914 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 METP08581 1390 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 SCN2BO60939 215 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 ERAL1O75616 437 aaKnown RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 ADH6P28332 368 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 INTS6LQ5JSJ4 861 aaKnown RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 CCDC71Q8IV32 467 aaPredicted RBP15.07■□□□□ 0
COL5A1-201ENST00000371817 SLC30A8Q8IWU4 369 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 PEX13Q92968 403 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 GFOD1Q9NXC2 390 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 FBXL3Q9UKT7 428 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 CTBP2P56545 445 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 FADDQ13158 208 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 TSPAN33Q86UF1 283 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 PHTF2Q8N3S3 785 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 C14orf105Q9NVL8 296 aa15.07■□□□□ 0
COL5A1-201ENST00000371817 CHRM5P08912 532 aaPredicted RBP15.06■□□□□ 0
COL5A1-201ENST00000371817 ZNF410Q86VK4 478 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 DNAJB3Q8WWF6 145 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 CXCR6O00574 342 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 NOS2P35228 1153 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 ZNF143P52747 638 aaPredicted RBP15.06■□□□□ 0
COL5A1-201ENST00000371817 HEPACAMQ14CZ8 416 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 CHSY3Q70JA7 882 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 CMC1Q7Z7K0 106 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 FAM35AQ86V20 835 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 ZNF227Q86WZ6 799 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 OR12D3Q9UGF7 316 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 RGL2O15211 777 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 SREBF1P36956 1147 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 PDX1P52945 283 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 TMBIM6P55061 237 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 MOGSQ13724 837 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 USP41Q3LFD5 358 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 SPOCK2Q92563 424 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 ITPKCQ96DU7 683 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 BORCS7-ASMTA0A0B4J1R7 106 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 GMFGO60234 142 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 RHDQ02161 417 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 TPGS1Q6ZTW0 290 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 BRINP3Q76B58 766 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 DNASE1L2Q92874 299 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 DHRS1Q96LJ7 313 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 GAL3ST1Q99999 423 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 OR51V1Q9H2C8 321 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 A0A0U1RQJ8 604 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 ABCB7O75027 752 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 UBXN11Q5T124 520 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 ADGRG6Q86SQ4 1221 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 ARMC5Q96C12 935 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 COQ8BQ96D53 544 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 RAD9AQ99638 391 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 MOXD2PA6NHM9 499 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 F5H0A9 414 aaPredicted RBP15.06■□□□□ 0
COL5A1-201ENST00000371817 GADD45GO95257 159 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 RAB36O95755 333 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 CSF2P04141 144 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 SETD4Q9NVD3 440 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 VWA7Q9Y334 891 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 ARID1AO14497 2285 aa15.06■□□□□ 0
COL5A1-201ENST00000371817 E5RJQ4 531 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 TGM6O95932 706 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 MTHFD1P11586 935 aaKnown RBP15.05■□□□□ 0
COL5A1-201ENST00000371817 AGTR1P30556 359 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 RAB5CP51148 216 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 XKP51811 444 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 TARDBPQ13148 414 aaKnown RBP eCLIP15.05■□□□□ 0
COL5A1-201ENST00000371817 ARL13AQ5H913 290 aaPredicted RBP15.05■□□□□ 0
COL5A1-201ENST00000371817 FAM156AQ8NDB6 213 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 SCGB1C1Q8TD33 95 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 ACTR6Q9GZN1 396 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 BRD9Q9H8M2 597 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 SCAMP1O15126 338 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 XKR4Q5GH76 650 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 ZNF773Q6PK81 442 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 UBQLNLQ8IYU4 475 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 TMEM203Q969S6 136 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 DUSP16Q9BY84 665 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 SGK2Q9HBY8 427 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 ACVR2AP27037 513 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 DAG1Q14118 895 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 SNX29P2Q8IUI4 249 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 CYP4X1Q8N118 509 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 OR4L1Q8NH43 312 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 TBC1D16Q8TBP0 767 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 EPS8L1Q8TE68 723 aa15.05■□□□□ 0
COL5A1-201ENST00000371817 MCCC1Q96RQ3 725 aaPredicted RBP15.05■□□□□ 0
COL5A1-201ENST00000371817 SSU72Q9NP77 194 aaKnown RBP15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms